BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12104 (UTR included)
(1969 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1938_C1 2210 0.0
>BF14_1938_C1
Length = 1144
Score = 2210 bits (1115), Expect = 0.0
Identities = 1136/1143 (99%), Gaps = 3/1143 (0%)
Strand = Plus / Plus
Query: 418 tcagtttctgatggcttgattaatttgattaacattttatttttccattataattacata 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcagtttctgatggcttgattaatttgattaacattttatttttccattataattacata 61
Query: 478 ttttggttagagcttgaccgacgatggctctgctgccgcccgacccggtttttacgataa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttttggttagagcttgaccgacgatggctctgctgccgcccgacccggtttttacgataa 121
Query: 538 gaaacgtggacaactctccagtatacagcttggcttttagttttctaccgggcgggctcg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaaacgtggacaactctccagtatacagcttggcttttagttttctaccgggcgggctcg 181
Query: 598 agaggttactcgccggctcaaaaaacggatatgtttatgcatacaaccttcagactaacc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agaggttactcgccggctcaaaaaacggatatgtttatgcatacaaccttcagactaacc 241
Query: 658 gggtgcagcaaaagatcaaagtaggtcaagctcccatccttcatcttattcacacagaca 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gggtgcagcaaaagatcaaagtaggtcaagctcccatccttcatcttattcacacagaca 301
Query: 718 accaactgatcactcaagagaaaggcggtaaattcaaaatcttcaacctaacaaattctg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 accaactgatcactcaagagaaaggcggtaaattcaaaatcttcaacctaacaaattctg 361
Query: 778 gatacaaagaggagcagattatagacattgattaccctggattttgccgttttgtagcca 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gatacaaagaggagcagattatagacattgattaccctggattttgccgttttgtagcca 421
Query: 838 acacagaactcgaaacactctatgtacctgatggggatgccagaatacaaatttataact 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 acacagaactcgaaacactctatgtacctgatggggatgccagaatacaaatttataact 481
Query: 898 tctctggggaaaaattgggcattctgaaacctgatgataattcacccaaactcggagaaa 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tctctggggaaaaattgggcattctgaaacctgatgataattcacccaaactcggagaaa 541
Query: 958 ctatgtgcatgaagttgattgaatttccaaatgacaagccctgccttcttgtgggctatg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctatgtgcatgaagttgattgaatttccaaatgacaagccctgccttcttgtgggctatg 601
Query: 1018 aggcaggttggctactcctatgggatctcaacactagtcaatgcattggcaaaatgcaga 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aggcaggttggctactcctatgggatctcaacactagtcaatgcattggcaaaatgcaga 661
Query: 1078 caaaggaatgtccaatgtccgtcgatttccatatcgaacaacaaagaggtataattggca 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caaaggaatgtccaatgtccgtcgatttccatatcgaacaacaaagaggtataattggca 721
Query: 1138 atgcctcggatgtgatacaaatatttagtataagcaaaaaagacttcagcctgacccaca 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atgcctcggatgtgatacaaatatttagtataagcaaaaaagacttcagcctgacccaca 781
Query: 1198 aaatggatgtgggtattaaaaacccggggataaacaaagttagtacaagaagtgacggca 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaatggatgtgggtattaaaaacccggggataaacaaagttagtacaagaagtgacggca 841
Query: 1258 gagtattcgcttccggcggctgggatgggcatatccgtatattttcttggttttctctga 1317
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 842 gagtattcgcttccggcggctgggatgggcatatccgtatattctcttggttttctctga 901
Query: 1318 gacaactggtcgtacttactgaacatagacaggccgtacaggaagtcgtttattccgatc 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gacaactggtcgtacttactgaacatagacaggccgtacaggaagtcgtttattccgatc 961
Query: 1378 aaaaagtttcctattggaatgcaaatataatggccgccggtggcctagacggtgccataa 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 aaaaagtttcctattggaatgcaaatataatggccgccggtggcctagacggtgccataa 1021
Query: 1438 cattatgggatttgtataacactaagaaatagtgttata---attttaaaatcacaattt 1494
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1022 cattatgggatttgtataacactaagaaatagtgttataattattttaaaatcacaattt 1081
Query: 1495 cagcaaaacaagacatgtaatacatatgcaccagaaatataaagttatcgaaccatattg 1554
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1082 cagcaaaacaagacatgtaatacatatgcaccagaaatataanngtatcgaaccatattg 1141
Query: 1555 atg 1557
|||
Sbjct: 1142 atg 1144
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,130
Number of extensions: 5196
Number of successful extensions: 5196
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5195
Number of HSP's successfully gapped: 1
Length of query: 1969
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1952
Effective length of database: 8,119,229
Effective search space: 15848735008
Effective search space used: 15848735008
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)