BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12113 (UTR included)
(2782 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 242 3e-63
BF01031B2E06 139 3e-32
BF14_335_C4 133 2e-30
BF01043B1E03 119 3e-26
BF01016B1E06 119 3e-26
BF01019A1H08 100 2e-20
BF01049B1F01 94 1e-18
BF01014B2F02 78 9e-14
BF14_335_C5 74 1e-12
BF01037A2H12 72 5e-12
BF14_1938_C1 70 2e-11
>BF14_335_C2
Length = 1827
Score = 242 bits (122), Expect = 3e-63
Identities = 343/414 (82%), Gaps = 17/414 (4%)
Strand = Plus / Minus
Query: 2324 tatttctgtattagggaatttgaaagcgcgctgtgctaatagagctcacggttccttggg 2383
|||||||||||| | |||||| |||||||||| ||||||||||| ||||||||||||
Sbjct: 1274 tatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttgga 1215
Query: 2384 aaaccaacatccccaaagaccatgccatcaaggtcaacgagtattacgagctcactaaga 2443
| ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||| ||
Sbjct: 1214 agaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcactagga 1155
Query: 2444 atatgttcgttgt-aaatttgtatgcggtagaagt-------agatcgagaggtataaca 2495
||| |||||| | ||||||||| | ||||||||| || |||||||||||||
Sbjct: 1154 ataggttcgtaataaaatttgtacgtggtagaagtgggagaaagtgagagaggtataaca 1095
Query: 2496 gccaaatctctctacaacctactaaaagacttaggcctgtcgagaactaacgtgaattca 2555
|| ||||||||||||| |||||||||| |||| |||||||| ||||||||| | ||||
Sbjct: 1094 gctaaatctctctacagcctactaaaatacttgggcctgtccagaactaacaccagttca 1035
Query: 2556 ttcttggaacgtgcgtcgagggcagccctagcaggctcgtttcaaatttggttagtcaga 2615
||||| |||||| | |||| | |||| |||| ||| ||||||||||||||||||| ||
Sbjct: 1034 ttcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttggttag---ga 978
Query: 2616 gagaagagcttggacagtggaggagagcg--attaacgc----acgctagggccctttaa 2669
|||| |||||||||| ||||||| ||||| || |||| | ||||| | ||||
Sbjct: 977 gagaggagcttggacggtggaggtgagcgttatgtacgcgagttagataggggctcttaa 918
Query: 2670 acctacacctgggtcgccagtcccaggtactgttgaagctcctctctctgcaac 2723
||||||||||| ||||| | ||||||| |||||||||||||||||| |||||||
Sbjct: 917 acctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaac 864
>BF01031B2E06
Length = 707
Score = 139 bits (70), Expect = 3e-32
Identities = 144/166 (86%), Gaps = 2/166 (1%)
Strand = Plus / Plus
Query: 2383 gaaaccaacatccccaaagaccatgccatcaaggtcaacgagtattacg-agctcactaa 2441
||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 2442 gaatatgttcgttgtaaatttgtatgcggtagaagt-agatcgagaggtataacagccaa 2500
||||| |||||| | ||||||||| ||||||||||| || |||| | | ||| ||| ||
Sbjct: 496 gaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaa 555
Query: 2501 atctctctacaacctactaaaagacttaggcctgtcgagaactaac 2546
||||||| |||||||||||||| ||| |||||||| ||| |||||
Sbjct: 556 atctctccacaacctactaaaaaccttgggcctgtccagatctaac 601
>BF14_335_C4
Length = 1491
Score = 133 bits (67), Expect = 2e-30
Identities = 142/167 (85%), Gaps = 5/167 (2%)
Strand = Plus / Plus
Query: 2554 cattcttggaacgtgcgtcgagggcagccctagcaggctcgtttcaaatttggttagtca 2613
||||||||||||||| ||| | ||||||||||||||| ||| |||| |||||||||| |
Sbjct: 1135 cattcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggta 1194
Query: 2614 gagagaagagcttggacagtggaggagagcgattaacgcacgctag-----ggcccttta 2668
|||||| ||||||||| ||| |||| ||||| |||| || || || ||||| |||
Sbjct: 1195 gagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaagataaaggcccctta 1254
Query: 2669 aacctacacctgggtcgccagtcccaggtactgttgaagctcctctc 2715
|||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1255 aacctacacctgggtcgcaagtcccaggcactgttgaagctcctctc 1301
>BF01043B1E03
Length = 830
Score = 119 bits (60), Expect = 3e-26
Identities = 206/254 (81%), Gaps = 8/254 (3%)
Strand = Plus / Plus
Query: 2485 gaggtataacagccaaatctctctacaacctactaaaagacttaggcctgtcgagaacta 2544
||||||||||||| |||||||||||||||||| ||| |||| ||||| | |||||||
Sbjct: 213 gaggtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaacta 272
Query: 2545 acgtgaattcattcttggaacgtgcgtcgagggcagccctagcaggctcgtttcaaattt 2604
|| | || ||||||||||||||| | | | ||||| ||| ||| | |||||||||||
Sbjct: 273 acatcaaatcattcttggaacgtactgcaaaggcaggcct---aggtttgtttcaaattt 329
Query: 2605 ggttagtcagagagaagagcttggacagtggaggagagcgattaacgcacgcta-----g 2659
|||||| ||||||| || ||||||||||||||| |||| ||||||| || || |
Sbjct: 330 ggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcgttagatagg 389
Query: 2660 ggccctttaaacctacacctgggtcgccagtcccaggtactgttgaagctcctctctctg 2719
||||||||||||||| |||||||| || ||||||| | ||| ||| | |||||||| | |
Sbjct: 390 ggccctttaaacctatacctgggttgcaagtcccaagcactattggacctcctctcccag 449
Query: 2720 caaccatggacccg 2733
|||| |||||||||
Sbjct: 450 caacgatggacccg 463
>BF01016B1E06
Length = 606
Score = 119 bits (60), Expect = 3e-26
Identities = 114/131 (87%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 2595 tttcaaatttggttagtcagagagaagagcttggacagtggaggagagcgattaacgcac 2654
|||||||||||||||| ||||||| ||| |||||| ||||||| ||||| |||||||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcgt 264
Query: 2655 --gctagggccctttaaacctacacctgggtcgccagtcccaggtactgttgaagctcct 2712
| |||||||| ||||||||||||||||||||| | |||| || |||||||||||||||
Sbjct: 263 tagatagggccccttaaacctacacctgggtcgctactccccggcactgttgaagctcct 204
Query: 2713 ctctctgcaac 2723
|||||||||||
Sbjct: 203 ctctctgcaac 193
>BF01019A1H08
Length = 504
Score = 99.6 bits (50), Expect = 2e-20
Identities = 80/89 (89%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 2661 gccctttaaacctacacctgggtcgccagtcccaggtactgttgaagctcctctctctgc 2720
|||| ||||||||||||||||||||| | ||||||| |||||||||||||||||| ||||
Sbjct: 482 gccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgc 423
Query: 2721 aa--ccatggacccggcatccgcacggtg 2747
|| | |||||||||||| ||||||||||
Sbjct: 422 aacgcgatggacccggcacccgcacggtg 394
>BF01049B1F01
Length = 840
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 2657 tagggccctttaaacctacacctgggtcgccagtcccaggtactgttgaagctcctctct 2716
|||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 654 tagggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 595
Query: 2717 ctgcaac 2723
|||||||
Sbjct: 594 ctgcaac 588
>BF01014B2F02
Length = 623
Score = 77.8 bits (39), Expect = 9e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 2673 tacacctgggtcgccagtcccaggtactgttgaagctcctctctctgcaaccatggaccc 2732
|||||||||||||| ||||| ||| ||| ||||||||||||| ||||||| |||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 2733 ggcatccgcacggtg 2747
|||| ||||||||||
Sbjct: 563 ggcacccgcacggtg 549
>BF14_335_C5
Length = 1597
Score = 73.8 bits (37), Expect = 1e-12
Identities = 113/140 (80%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 2613 agagagaagagcttggacagtggaggagagcgattaacgcacgctag-----ggcccttt 2667
||||||| |||||||||| ||||||| ||||| |||| || || ||| ||| | ||
Sbjct: 1442 agagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcgcctt 1501
Query: 2668 aaacctacacctgggtcgccagtcccaggtactgttgaagctcctctctctgcaaccatg 2727
|||||||||| |||| ||||||||| |||||||||||||||||| ||||| |||
Sbjct: 1502 aaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaaagatg 1561
Query: 2728 gacccggcatccgcacggtg 2747
|||||||| ||||||||||
Sbjct: 1562 cacccggcacccgcacggtg 1581
>BF01037A2H12
Length = 773
Score = 71.9 bits (36), Expect = 5e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 2453 ttgtaaatttgtatgcggtagaagtag-atcgagaggtataacagccaaatctctctaca 2511
|||| |||||||| | |||| |||||| | |||||||||||| ||||||||||||| |||
Sbjct: 666 ttgtgaatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgaca 725
Query: 2512 acctactaaaagactt 2527
|||| |||||||||||
Sbjct: 726 acctgctaaaagactt 741
>BF14_1938_C1
Length = 1144
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1 atgttaatcaaattaatcaagccatcagaaactga 35
|||||||||||||||||||||||||||||||||||
Sbjct: 36 atgttaatcaaattaatcaagccatcagaaactga 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,813
Number of extensions: 5569
Number of successful extensions: 5569
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 5566
Number of HSP's successfully gapped: 14
Length of query: 2782
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2765
Effective length of database: 8,119,229
Effective search space: 22449668185
Effective search space used: 22449668185
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)