BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12130 (UTR included)
(2488 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_415_C1 1606 0.0
BF01061A2F04 569 e-162
>BF14_415_C1
Length = 826
Score = 1606 bits (810), Expect = 0.0
Identities = 822/826 (99%)
Strand = Plus / Plus
Query: 445 atcgccacatttgtagggttttgtaaatataaatcgccctataaatcgatcaaaatatgg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgccacatttgtagggttttgtaaatataaatcgccctataaatcgatcaaaatatgg 60
Query: 505 gatacaaatttttgaggctagcttcaacttcattcaggaatggaaatgtaccaattggta 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatacaaatttttgaggctagcttcaacttcattcaggaatggaaatgtaccaattggta 120
Query: 565 taagacattactcttccgcccatgacgccgacctagtggtgatcgggtctggccctggtg 624
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 taagacattactcttccgcccatgacgccgacttagtggtgatcgggtctggccctggtg 180
Query: 625 gatatgtagcagctatcaaagctgcacaaatgggtttgaagactatctctgttgaaaaag 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatatgtagcagctatcaaagctgcacaaatgggtttgaagactatctctgttgaaaaag 240
Query: 685 atcctaccctgggcggtacttgtttgaatgttggctgtattccctcaaaggccctacttc 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcctaccctgggcggtacttgtttgaatgttggctgtattccctcaaaggccctacttc 300
Query: 745 acaattcccacttatatcatatggcgaaacatgattttaaacacagaggtattgaagttg 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaattcccacttatatcatatggcgaaacatgattttaaacacagaggtattgaagttg 360
Query: 805 gcaatatttctttcaactttgaggctatgatgaagtacaaagaaaatgctgttaaagccc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaatatttctttcaactttgaggctatgatgaagtacaaagaaaatgctgttaaagccc 420
Query: 865 taactggtggtatcggcatgttgtttaataagaacaaggttaaactagttcgagggcatg 924
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 421 tgactggtggtatcggcatgttgttcaataagaacaaggttaaactagttcgagggcatg 480
Query: 925 gttccattgtcgctccaaacaaagttgaagtcaaaggagagaaaggcgttgaaacaatta 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 gttccattgtcgctccaaacaaagttgaagtcaaaggagagaaaggcgttgaaactatta 540
Query: 985 acacaaaaaacattattattgcaactggctctgtagttacacccttcccaggcgtcacat 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acacaaaaaacattattattgcaactggctctgtagttacacccttcccaggcgtcacat 600
Query: 1045 ttgatgaaaaacaaatagtctcgtcaacgggagccctatctttacctaaaatgccgaaaa 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgatgaaaaacaaatagtctcgtcaacgggagccctatctttacctaaaatgccgaaaa 660
Query: 1105 agatgttggttattggcgcaggagttattggtcttgagctgggttcagtttaccaaagac 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agatgttggttattggcgcaggagttattggtcttgagctgggttcagtttaccaaagac 720
Query: 1165 tgggtgccgatgtaacagccattgagttcctagagaatattggaggggtcggtatcgatg 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgggtgccgatgtaacagccattgagttcctagagaatattggaggggtcggtatcgatg 780
Query: 1225 gtgaggtttccaaaaccctgcataagatcatgtcgaagcaaggtat 1270
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgaggtttccaaaaccctgcataagatcatgtcgaagcaaggtat 826
>BF01061A2F04
Length = 299
Score = 569 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 1588 tcaaaggtatgccggtacacttcaactacgatgcgatcccatcggttatttacaccagcc 1647
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9 tcaaaggtatgccggtacacttcaactacgatgcgatcccgtcggttatttacaccagcc 68
Query: 1648 ctgaagtgggttgggtcgggaaaacggaggaggatctcaagaaagagggaaaagcataca 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ctgaagtgggttgggtcgggaaaacggaggaggatctcaagaaagagggaaaagcataca 128
Query: 1708 aagtgggcaaatttccgttcctagccaattctcgcgctaaaacaaacggcgaaccagacg 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aagtgggcaaatttccgttcctagccaattctcgcgctaaaacaaacggcgaaccagacg 188
Query: 1768 gcttcgtgaaggttttggctgacaaggcgaccgacgtcatactaggaacacatatcattg 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gcttcgtgaaggttttggctgacaaggcgaccgacgtcatactaggaacacatatcattg 248
Query: 1828 gaccgggaggcggcgagttgatcaacgaggctgtcttggcgcaggagtatg 1878
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gaccgggaggcggcgagttgatcaacgaggctgtcttggcgcaggagtatg 299
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,403
Number of extensions: 7165
Number of successful extensions: 7165
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7165
Number of HSP's successfully gapped: 2
Length of query: 2488
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2471
Effective length of database: 8,119,229
Effective search space: 20062614859
Effective search space used: 20062614859
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)