BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12131 (UTR included)
(1549 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B2H08 119 1e-26
>BF01005B2H08
Length = 279
Score = 119 bits (60), Expect = 1e-26
Identities = 114/131 (87%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 1408 atatgatatgagaaataagaaacat--gttttcgaatgaaggttagaaacatatctagag 1465
||||||||||||| |||||| |||| |||||||||||||| ||||||| |||||||| |
Sbjct: 279 atatgatatgagatataagatacatatgttttcgaatgaagattagaaagatatctagtg 220
Query: 1466 aaacctgcatcaattgctgttccatatgttgtgatagactaattttggttattattcatt 1525
||| |||||||||| | |||| || || ||||| |||| | |||||||||||||||||||
Sbjct: 219 aaaactgcatcaatagttgtttcaaatcttgtggtagaatcattttggttattattcatt 160
Query: 1526 caaattaaatt 1536
|| ||||||||
Sbjct: 159 cacattaaatt 149
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,739
Number of extensions: 8031
Number of successful extensions: 8031
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8030
Number of HSP's successfully gapped: 1
Length of query: 1549
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1532
Effective length of database: 8,119,229
Effective search space: 12438658828
Effective search space used: 12438658828
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)