BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12139 (UTR included)
(4165 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1661_C1 692 0.0
BF01049B1B12 339 2e-92
>BF14_1661_C1
Length = 1250
Score = 692 bits (349), Expect = 0.0
Identities = 352/353 (99%)
Strand = Plus / Plus
Query: 3182 gtctaattcgaatcaaaagtcaccagctggtatgttgcccggcacccctgagggtcattc 3241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctaattcgaatcaaaagtcaccagctggtatgttgcccggcacccctgagggtcattc 60
Query: 3242 gtcgctttcggaacaacgcgctgggcggttctctatggagcagagtcctggcttcaacaa 3301
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 gtcgctttcggaacaacgcgctgggcggttctctatggagcagagtcctgggttcaacaa 120
Query: 3302 tccccaaacgccaaccggtcccaataaatgcgcacaggatgaaaaatcccgacccagtcc 3361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccccaaacgccaaccggtcccaataaatgcgcacaggatgaaaaatcccgacccagtcc 180
Query: 3362 atcatcgaacaggtcaagtcaggacagtgcgtccaagacccctcagagggaaggtcggga 3421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcatcgaacaggtcaagtcaggacagtgcgtccaagacccctcagagggaaggtcggga 240
Query: 3422 gggtccgtcactcagtcagggaccttacgcgccttcctccaccgccaagagcagctgtag 3481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtccgtcactcagtcagggaccttacgcgccttcctccaccgccaagagcagctgtag 300
Query: 3482 tgtagtatcagccccctcccactccgacgacaccatggcttccaacactgaga 3534
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtagtatcagccccctcccactccgacgacaccatggcttccaacactgaga 353
>BF01049B1B12
Length = 786
Score = 339 bits (171), Expect = 2e-92
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 3532 agaaaaaaaatatgcacaattacatcgctcgtcgaccgacttgtcgtgccgtcaccgcac 3591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agaaaaaaaatatgcacaattacatcgctcgtcgaccgacttgtcgtgccgtcaccgcac 675
Query: 3592 acgacattacaacggcgcggcaatcttgtgagatacaacacaccagtccagttaaaacac 3651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 acgacattacaacggcgcggcaatcttgtgagatacaacacaccagtccagttaaaacac 735
Query: 3652 ccgctagaaattagatagaattaaatttaactgtaattataatgttaaggt 3702
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ccgctagaaattagatagaattaaatttaactgtaattataatgttaaggt 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 408,841
Number of extensions: 9078
Number of successful extensions: 9078
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9078
Number of HSP's successfully gapped: 2
Length of query: 4165
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4147
Effective length of database: 8,109,745
Effective search space: 33631112515
Effective search space used: 33631112515
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)