BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12141 (UTR included)
(1229 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A1E05 854 0.0
BF01049B2H03 101 3e-21
BF01042A2B06 76 1e-13
BF14_1695_C1 74 6e-13
BF01058A1C03 70 9e-12
BF01022A1G02 70 9e-12
BF01061B1E05 68 4e-11
BF14_729_C3 68 4e-11
>BF01055A1E05
Length = 793
Score = 854 bits (431), Expect = 0.0
Identities = 465/476 (97%), Gaps = 4/476 (0%)
Strand = Plus / Plus
Query: 641 aggtgagccggctgagtgcagaggtccaaagtcaggcacgggaactgaagacactgaggg 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aggtgagccggctgagtgcagaggtccaaagtcaggcacgggaactgaagacactgaggg 377
Query: 701 ccgccgtgagtcaaccctacaccatttagattaccttttgacaaccctaatacatgacgt 760
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 378 ccgccgtgagtcaaccctacaccatttagattacgttttgacaaccctaatacatgacgt 437
Query: 761 ctaatattaaatgacaaacttgtattttctcatatac----tttaatttttgaactaatg 816
||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 438 ctaatattatacgacaaacttgtattttctcatatacctactttaatttttgaactaatg 497
Query: 817 ttcgtaattacactgtatttttatcttacatccagttgtactgtaacatacagtaaatta 876
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttcgtaatcacactgtatttttatcttacatccagttgtactgtaacatacagtaaatta 557
Query: 877 ttacaatactggatattcacgtgttttggttttttagatgtctttttattattgtagtgg 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttacaatactggatattcacgtgttttggttttttagatgtctttttattattgtagtgg 617
Query: 937 caaccctgctgatatatcacattttagtatctgtgcactttatatgctgtattatgtcaa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 caaccctgctgatatatcacattttagtatctgtgcactttatatgctgtattatgtcaa 677
Query: 997 gagtaaagaattattactgtactgagaattgctttttttcttaattagttttgcttcaat 1056
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gagtaaagaagtattactgtactgagaattgctttttttcttaattagttttgcttcaat 737
Query: 1057 acgttactacgcttgctttgttacgtgttttagtttttatcttgcacatgatcggt 1112
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 738 atgttactacgcttgctttgttacgtgttatagtttttatcttgcacatgatcggt 793
>BF01049B2H03
Length = 832
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 35 acgcgtagtaatcagaaaaatattagtttcatttaaatgaatactcgcgaaagtcttaga 94
|||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 287 acgcttagtaatccgaaaaatattagtttcatttaaatgaatactcgctaaaatcttaga 346
Query: 95 tatcattatat 105
| |||||||||
Sbjct: 347 tctcattatat 357
>BF01042A2B06
Length = 781
Score = 75.8 bits (38), Expect = 1e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 34 aacgcgtagtaatcagaaaaatattagtttcatttaaatgaatactcgcgaaagtcttag 93
|||||||||||||| ||||| ||||| ||| ||||||| ||||||||||||||||||| |
Sbjct: 306 aacgcgtagtaatccgaaaa-tattactttaatttaaacgaatactcgcgaaagtctttg 364
Query: 94 atatcattat 103
|| |||||||
Sbjct: 365 atctcattat 374
>BF14_1695_C1
Length = 1407
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 58 tagtttcatttaaatgaatactcgcgaaagtcttagatatcatta 102
||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 1064 tagtttcatttaaatgaatactcgcgaaaatcttagatctcatta 1020
>BF01058A1C03
Length = 779
Score = 69.9 bits (35), Expect = 9e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 51 aaaatattagtttcatttaaatgaatactcgcgaa 85
|||||||||||||||||||||||||||||||||||
Sbjct: 489 aaaatattagtttcatttaaatgaatactcgcgaa 523
>BF01022A1G02
Length = 638
Score = 69.9 bits (35), Expect = 9e-12
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 33 aaacgcgtagtaatcagaaaaatattagtttcatttaaatgaatactcgcgaaagtctta 92
||||||||||||||| ||||| |||||| |||||||||||||| |||| || ||||||||
Sbjct: 567 aaacgcgtagtaatccgaaaa-tattagcttcatttaaatgaacactcccgcaagtctta 509
Query: 93 gatatcattat 103
|| |||||||
Sbjct: 508 aatctcattat 498
>BF01061B1E05
Length = 745
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 58 tagtttcatttaaatgaatactcgcgaaagtcttagat 95
||||||||||||||||||||||||||||| ||||||||
Sbjct: 13 tagtttcatttaaatgaatactcgcgaaaatcttagat 50
>BF14_729_C3
Length = 2041
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 36 cgcgtagta-atcagaaaaatattagtttcatttaaatgaatactcgcgaaagtcttaga 94
||||||||| ||| ||| |||| ||| ||||||||||||||||||||||||| |||||||
Sbjct: 1664 cgcgtagtatatccgaataatactagcttcatttaaatgaatactcgcgaaaatcttaga 1723
Query: 95 tatcat 100
| ||||
Sbjct: 1724 tctcat 1729
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 141,235
Number of extensions: 2849
Number of successful extensions: 2849
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2846
Number of HSP's successfully gapped: 8
Length of query: 1229
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1212
Effective length of database: 8,119,229
Effective search space: 9840505548
Effective search space used: 9840505548
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)