BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12150 (UTR included)
(1576 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 168 2e-41
BF01060B1D11 153 1e-36
>BF01047B2H03
Length = 758
Score = 168 bits (85), Expect = 2e-41
Identities = 261/320 (81%), Gaps = 11/320 (3%)
Strand = Plus / Minus
Query: 89 gatgaatctaaaaaggccatcggagctctataaacacttaagagtttacaagagacatat 148
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 149 cctggggaaatcccaggatgacgttattcccttattattcactcccaaaagtcaaaaata 208
|| ||||||| |||| |||| || ||| | | ||||| ||||| | | ||
Sbjct: 698 cccggggaaagcccataatgatgtcattacat-------cactctcaaaaaatagagatg 646
Query: 209 ccctagagctagaatcgagacttcaattccataaacagtttatgataggggcacaaagta 268
||| || ||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 645 cccctgaactaaagtcaagacttcaattccataaacagtttatgataggagcacaaagta 586
Query: 269 agtaaatagagtagggttaggctcaagtacgaaggccaaagatacgaatatattaaagac 328
| | ||||||| ||||| ||||| | ||||||| |||||||| ||||||| ||| |
Sbjct: 585 acga----gagtaggattaggatcaaggaagaaggcccaagatacggatatattgaagtc 530
Query: 329 ctttattcggcatgacgagaattctaaatataagatccatgctatgagcttagaaatgca 388
||||||||||| ||||||||| | |||||| |||||||| ||||| ||||| |||||
Sbjct: 529 ttttattcggcaagacgagaatgatggatataacatccatgcaatgagtttagatatgca 470
Query: 389 aaatgagtggctacacatag 408
|| |||||| || ||||||
Sbjct: 469 gaacgagtggttagacatag 450
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 554 aacttgttacatctgcggggaggcagttagaactgctaagcatttgctggtgggatgtag 613
|||||| || ||||||| |||||||||| ||| |||| ||||||||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 614 ggtactcctggttagtggtcaatact 639
| ||||||||| ||| ||||||||||
Sbjct: 305 gctactcctggatagcggtcaatact 280
>BF01060B1D11
Length = 799
Score = 153 bits (77), Expect = 1e-36
Identities = 302/376 (80%), Gaps = 12/376 (3%)
Strand = Plus / Minus
Query: 34 ggctcgcgctatcggctgattcgtcagcgttattcagggatcgaaataattttgagatga 93
|||||||| |||| ||||| |||| || ||| | |||||||| |||| ||||| |||||
Sbjct: 642 ggctcgcgacatcgactgatacgtcggctttaattagggatcgcaatagttttgggatga 583
Query: 94 atctaaaaaggccatcggagctctataaacacttaagagtttacaagagacatatcctgg 153
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 582 gtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatatcccgg 523
Query: 154 ggaaatcccaggatgacgttattcccttattattcactcccaaaagtcaaaaatacccta 213
||||| |||| |||| || ||| | |||||||||||| | | || || |
Sbjct: 522 ggaaagcccataatgatgtcattac-------atcactcccaaaaaccggagatggccca 470
Query: 214 gagctagaatc-gagacttcaattccataaacagtttatgataggggcacaaagtaagta 272
|| ||| | || ||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 469 gaactaaagtctgagacttcaattccacaaacagtttatgataggagcaca----aagta 414
Query: 273 aatagagtagggttaggctcaagtacgaaggccaaagatacgaatatattaaagaccttt 332
| |||||||| ||||| ||||| | |||||| |||||| | ||||||| ||| |||
Sbjct: 413 acgagagtaggattaggatcaaggaagaaggctcaagatatggatatattgaagtatttt 354
Query: 333 attcggcatgacgagaattctaaatataagatccatgctatgagcttagaaatgcaaaat 392
|||| ||| ||||||||| | ||||||||||||||| ||| | ||||| ||||| ||
Sbjct: 353 attcagcaagacgagaatgatggatataagatccatgcaatgcgtttagagatgcagaac 294
Query: 393 gagtggctacacatag 408
|||||| || ||||||
Sbjct: 293 gagtggttagacatag 278
Score = 93.7 bits (47), Expect = 8e-19
Identities = 99/116 (85%), Gaps = 4/116 (3%)
Strand = Plus / Minus
Query: 508 tcccagatcagagtcatttagtaaga----tggggcaaaggtaccgaaaaaacttgttac 563
|||||||||||||| ||||||||||| |||| |||| ||||||||||||||| ||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 564 atctgcggggaggcagttagaactgctaagcatttgctggtgggatgtagggtact 619
|| |||| | |||||||| ||| |||||||||||||||| ||||||||||| ||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgtaggctact 119
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 160,497
Number of extensions: 2989
Number of successful extensions: 2989
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2988
Number of HSP's successfully gapped: 6
Length of query: 1576
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1559
Effective length of database: 8,119,229
Effective search space: 12657878011
Effective search space used: 12657878011
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)