BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12158 (UTR included)
(1333 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_342_C1 1457 0.0
>BF14_342_C1
Length = 791
Score = 1457 bits (735), Expect = 0.0
Identities = 750/755 (99%)
Strand = Plus / Plus
Query: 494 gcgacccatgtcagaaacttccatacaaggaaatcaagctaaggaagagcagccgccgtc 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gcgacccatgtcagaaacttccatacaaggaaatcaagctaaggaagagcagccgccgtc 72
Query: 554 aaaaataacggagtctgttaagaaaataatatcaatggaaaaagaaaatgaaacgaacgc 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aaaaataacggagtctgttaagaaaataatatcaatggaaaaagaaaatgaaacgaacgc 132
Query: 614 caatcgtaaatctcgtattgacctcaatgcactaccaacacgtcaatatctggaccagac 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 caatcgtaaatctcgtattgacctcaatgcactaccaacacgtcaatatctggaccagac 192
Query: 674 agtagttcccatactactgcagggtttatcagctctagccaaagaacgcccaccggaccc 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agtagttcccatactactgcagggtttatcagctctagccaaagaacgcccaccggaccc 252
Query: 734 tataaactatctagccgcatatctactgaagaataagagcacattcgataataataattc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tataaactatctagccgcatatctactgaagaataagagcacattcgataataataattc 312
Query: 794 aggtgccaacagcaatccaccccaaaatacacaaacatagtgatggtttagaagattctt 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aggtgccaacagcaatccaccccaaaatacacaaacatagtgatggtttagaagattctt 372
Query: 854 ttatagggctgccaacactcaattttaactgtaatagatgccagttgtacaatatagtgt 913
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctatagggctgccaacactcaattttaactgtaatagatgccagttgtacaatatagtgt 432
Query: 914 acaaagttttaaatgtacgtagctatataagtaactaaaccattaaagtaaatgggttgt 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acaaagttttaaatgtacgtagctatataagtaactaaaccattaaagtaaatgggttgt 492
Query: 974 ggtagaaaaggacattatagcactctcaaacttgtatttttagtgtagttttgagtatag 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 493 ggtagaaaaggacattatagcactctcaaacttgtatttttagtgtagttttgcgtatag 552
Query: 1034 ataaatgctttaaattaatattgttacttattggtataaatataatatataagacaatgc 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ataaatgctttaaattaatattgttacttattggtataaatataatatataagacaatgc 612
Query: 1094 aaacttaatttttattaagagtctgtaaaagaaggatagatttaattttccacaacaata 1153
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 613 aaacttaatttttattaagagtctgtaaaagaaggatagatttaattttccacaacaaca 672
Query: 1154 aggttttaatttttgtccattaagatgatacttttttaaatttgtcccttaaaacttgaa 1213
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 673 aggttttaatttttgtccattaagacgatacttttttaaatttctcccttaaaacttgaa 732
Query: 1214 ttgactttaattttattaaatattaaataccataa 1248
|||||||||||||||||||||||||||||||||||
Sbjct: 733 ttgactttaattttattaaatattaaataccataa 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,392
Number of extensions: 6633
Number of successful extensions: 6633
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6633
Number of HSP's successfully gapped: 1
Length of query: 1333
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1316
Effective length of database: 8,119,229
Effective search space: 10684905364
Effective search space used: 10684905364
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)