BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12162 (UTR included)
(3205 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B1H10 1314 0.0
BF01049B2H03 68 9e-11
>BF01059B1H10
Length = 684
Score = 1314 bits (663), Expect = 0.0
Identities = 672/675 (99%)
Strand = Plus / Plus
Query: 304 ataatataaacaaatcataattcttataaatttaatatatttatcaattaaatgtaattg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ataatataaacaaatcataattcttataaatttaatatatttatcaattaaatgtaattg 69
Query: 364 ttgtaacatatccttcttaagtgtttataataagcgcggtcagatacaacgctatgtgtg 423
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ttgtaacacatccttcttaagtgtttataataagcgcggtcagatacaacgctatgtgtg 129
Query: 424 tattcatcgattggtcaggggtggcgtgtctgagcgatcattaacccagttgtgagtcgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130 tattcatcgattggtcaggggtggcgtgtctgagcgatcattaacccagttgtaagtcgg 189
Query: 484 cggcgcggcagtacaccatgcaactaccggaacagccgccgcctccactcgctcctctat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cggcgcggcagtacaccatgcaactaccggaacagccgccgcctccactcgctcctctat 249
Query: 544 gggaccgagtgttaagagcccgagcgttacccccagatctagacgtacaactcctgtaca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gggaccgagtgttaagagcccgagcgttacccccagatctagacgtacaactcctgtaca 309
Query: 604 tagctattaaagaccgcctgtctcatcccgagtgggaggttcgattgcacgcgcttcgag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tagctattaaagaccgcctgtctcatcccgagtgggaggttcgattgcacgcgcttcgag 369
Query: 664 tcctcgccgatttattacccttatctggaaacgcgttatcattcccgttcgaccaagtcg 723
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcctcgccgatttattacctttatctggaaacgcgttatcattcccgttcgaccaagtcg 429
Query: 724 ttgataacttgggtcatccctcacctaatgtaaggaaagcagcgttggatgcgctcaaag 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgataacttgggtcatccctcacctaatgtaaggaaagcagcgttggatgcgctcaaag 489
Query: 784 ttttctgttcgcattgcgaggacccagaatgcgccgctcgagcgataatagataagtttt 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttttctgttcgcattgcgaggacccagaatgcgccgctcgagcgataatagataagtttt 549
Query: 844 cctacaataacataagaccgtattcgactgattttgataccaaaatgaatattgttaccg 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cctacaataacataagaccgtattcgactgattttgataccaaaatgaatattgttaccg 609
Query: 904 gtttgatattatcaataccgtctgttataagcatactgtatagaagacaaccaaatttag 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gtttgatattatcaataccgtctgttataagcatactgtatagaagacaaccaaatttag 669
Query: 964 acctatttccaatat 978
|||||||||||||||
Sbjct: 670 acctatttccaatat 684
>BF01049B2H03
Length = 832
Score = 67.9 bits (34), Expect = 9e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2879 tataatgagctctaagactttcgcgagtattcattttactgaaactaatatttt 2932
||||||||| ||||||| ||| |||||||||||||| | |||||||||||||||
Sbjct: 356 tataatgagatctaagattttagcgagtattcatttaaatgaaactaatatttt 303
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 411,478
Number of extensions: 9703
Number of successful extensions: 9703
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9703
Number of HSP's successfully gapped: 2
Length of query: 3205
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3187
Effective length of database: 8,109,745
Effective search space: 25845757315
Effective search space used: 25845757315
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)