BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12164 (UTR included)
(1954 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2900_C1 1713 0.0
>BF14_2900_C1
Length = 884
Score = 1713 bits (864), Expect = 0.0
Identities = 879/884 (99%)
Strand = Plus / Plus
Query: 240 gaattgtgaaaaatccgaaatagtaacagtaacgtttaatacgttactgtgggataaaaa 299
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 gaattgtgaaaaatccgaaatagtaacagtaacgtttaatacgttactgtggaataaaaa 60
Query: 300 gaaattcctaaataattttcttaatatcctttaactatttagcactggtgagccgtgagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaattcctaaataattttcttaatatcctttaactatttagcactggtgagccgtgagg 120
Query: 360 tggatatatatttcaatctggcggccacaatgctgtgtacaagtgtacgtactgattaaa 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaatatatatttcaatctggcggccacaatgctgtgtacaagtgtacgtactgattaaa 180
Query: 420 aaggaattatttaatcgagtattggttacgttgctacgtaaagtttttggattgctttta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggaattatttaatcgagtattggttacgttgctacgtaaagtttttggattgctttta 240
Query: 480 gttaaaactccgtgcagcatcatggacaactccagcaaactacaacagatgcaagatgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttaaaactccgtgcagcatcatggacaactccagcaaactacaacagatgcaagatgaa 300
Query: 540 atgtccagattcgaggcagagatctcaggatcggatctattggccatgcgcccagttata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgtccagattcgaggcagagatctcaggatcggatctattggccatgcgcccagttata 360
Query: 600 ggtgcgggaacctttggggctgtacagcaacaattagagcgggctctgcctcatcctcca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtgcgggaacctttggggctgtacagcaacaattagagcgggctctgcctcatcctcca 420
Query: 660 gcgatgatgccacagttcgatgtcatgggagctcgcttgatgtacccgactgtaccacca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgatgatgccacagttcgatgtcatgggagctcgcttgatgtacccgactgtaccacca 480
Query: 720 ccgcctccaccaccatccatgatggtaccagcgtcggtgcaaagacgtcccccttgtagt 779
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 481 ccgcctccaccaccatccatgatggtaccagcgtcggtgcaaagacgtccacctggtagt 540
Query: 780 gaagtatttcccccacatccattcataagacccgggattcccggaccccaaataccacca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaagtatttcccccacatccattcataagacccgggattcccggaccccaaataccacca 600
Query: 840 ccacctccaaaaccacagccggtagtgctcactgcggcccccaaactgtacaaacaatcc 899
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 601 ccacctccaaaaccacagccggtagtgctcaccgcggcccccaaactgtacaaacaatcc 660
Query: 900 aaggaagacgaagccctgaaagaccaacttgatggcaagaaaaggaaacgagaacgtcca 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaggaagacgaagccctgaaagaccaacttgatggcaagaaaaggaaacgagaacgtcca 720
Query: 960 ttgactcctccccgagagcctgagatagagccattacccccaccaccaatcgtccacata 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttgactcctccccgagagcctgagatagagccattacccccaccaccaatcgtccacata 780
Query: 1020 gacaccagtgcaccaaaggccaaaaaagagaaaaaacatagaaaggttgtgcgaacagcc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gacaccagtgcaccaaaggccaaaaaagagaaaaaacatagaaaggttgtgcgaacagcc 840
Query: 1080 ggtggtcagacttgggaggatgtgaccttacttgactggcccga 1123
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggtggtcagacttgggaggatgtgaccttacttgactggcccga 884
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,327
Number of extensions: 7174
Number of successful extensions: 7174
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7174
Number of HSP's successfully gapped: 1
Length of query: 1954
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1937
Effective length of database: 8,119,229
Effective search space: 15726946573
Effective search space used: 15726946573
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)