BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12167 (UTR included)
(1678 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A2E12 1671 0.0
BF14_499_C1 414 e-115
>BF01058A2E12
Length = 860
Score = 1671 bits (843), Expect = 0.0
Identities = 858/862 (99%), Gaps = 2/862 (0%)
Strand = Plus / Plus
Query: 422 tttttgaaagcaatatttaacttttttctattgcaaaattaatatttcaactagtttgtc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttttgaaagcaatatttaacttttttctattgcaaaattaatatttcaactagtttgtc 60
Query: 482 aagttacaaataatcgacaatgactacttttgattctaaatacgatatgtttccagccgg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagttacaaataatcgacaatgactacttttgattctaaatacgatatgtttccagccgg 120
Query: 542 tgatgtgggagtggtggaaggtgagatgaacattccatctcatggcggtcaaaccggtga 601
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgtgggagtggt--aaggtgagatgaacattccatctcatggcggtcaaaccggtga 178
Query: 602 tagcatggagttcaacacgctcgatgaacccatcaaggaaacatttctcagagatctcag 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tagcatggagttcaacacgctcgatgaacccatcaaggaaacatttctcagagatctcag 238
Query: 662 agctgtcggtaacaaattttatcatgtcctcatacctagagaaaagaccagtcttttaaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agctgtcggtaacaaattttatcatgtcctcatacctagagaaaagaccagtcttttaaa 298
Query: 722 agaatgggatctgtggggaccgttactactttgtacattcatggccacaatactccaagg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agaatgggatctgtggggaccgttactactttgtacattcatggccacaatactccaagg 358
Query: 782 ttcaacggaaattgctgacaattccaatgatggtgggccggaatttgctgaggtctttgt 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttcaacggaaattgctgacaattccaatgatggtgggccggaatttgctgaggtctttgt 418
Query: 842 tcttgtatggataggagctgctgttgtcactctcaatagcaaactgcttgggggcaacat 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcttgtatggataggagctgctgttgtcactctcaatagcaaactgcttgggggcaacat 478
Query: 902 atcatttttccagtccgtctgtgtgttgggatactgtctatgtccgattgctatctctct 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atcatttttccagtccgtctgtgtgttgggatactgtctatgtccgattgctatctctct 538
Query: 962 tgttgtatgtcgcatcatacttttcaccacacagaactcgttcctcttcttcctgcgcct 1021
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgttctatgtcgcatcatacttttcaccacacagaactcgttcctcttcttcctgcgcct 598
Query: 1022 tgttatatctatgatcggattcgcttgggctacttttgcggcaacaaaattcctcggtga 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 599 tgttatatctatgatcggattcgcttgggctacttttgcggcaacaaaattcctcggcga 658
Query: 1082 cagccaaccagatggaaagaaaggtctagcagtatttcctatatgtctgttctatttcat 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cagccaaccagatggaaagaaaggtctagcagtatttcctatatgtctgttctatttcat 718
Query: 1142 actgtcctggctggtcgtgtcgcacaataacgtctagattcttaatgaatagttatagga 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 actgtcctggctggtcgtgtcgcacaataacgtctagattcttaatgaatagttatagga 778
Query: 1202 atttagaataatttgtgaataattattagctaagtcaataattaagttttctaaacgcta 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 atttagaataatttgtgaataattattagctaagtcaataattaagttttctaaacgcta 838
Query: 1262 catgatgtaatctatttattta 1283
||||||||||||||||||||||
Sbjct: 839 catgatgtaatctatttattta 860
>BF14_499_C1
Length = 1575
Score = 414 bits (209), Expect = e-115
Identities = 231/236 (97%), Gaps = 3/236 (1%)
Strand = Plus / Minus
Query: 1443 gtctgttgtaaattttattgaatacattcaaaaacatatagtatatctaaaaatacgtat 1502
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 gtctgctgtaaattttattgaatacattcaaaaacatatagtatatctaaaaatacgtat 1516
Query: 1503 aattcgagatattcagtacgcgatggaatatttcataatgttttttggactagcatattg 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1515 aattcgagatattcagtacgcgatggaatatttcataatgttttttggactagcatattg 1456
Query: 1563 aatttcgataaatataaacgaaaatatattaa-aaaataatttaaggaactaatgcgaaa 1621
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 1455 aatttcgataaatataaacaaaaatatattaaaaaaataatttaaggaactaatgcgaaa 1396
Query: 1622 tgtatttaattctatgccaaatatattaacaacaggtttttattatgtgcgttcac 1677
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1395 tgtatttaattctatgccaaatatattaacaacaggtttt--ttatgtgcgttcac 1342
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,341
Number of extensions: 8104
Number of successful extensions: 8104
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8101
Number of HSP's successfully gapped: 2
Length of query: 1678
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1661
Effective length of database: 8,119,229
Effective search space: 13486039369
Effective search space used: 13486039369
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)