BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12184 (UTR included)
(1978 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A1F04 1350 0.0
BF14_612_C1 329 1e-89
>BF01041A1F04
Length = 705
Score = 1350 bits (681), Expect = 0.0
Identities = 699/705 (99%)
Strand = Plus / Plus
Query: 789 gtgagccacatacagaataacaaaccatttacctgcgatgactgtaaagcacagttcaaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgagccacatacagaataacaaaccatttacctgcgatgactgtaaagcacagttcaaa 60
Query: 849 aagaaagatcaacttgtggcccatatgtaccaacacaatggtattaaaccctatagatgt 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagaaagatcaacttgtggcccatatgtaccaacacaatggtattaaaccctatagatgt 120
Query: 909 aacatatgctcaaaagattttgttacattgtataaaagaagaaagcatatgagaaaccac 968
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgtatgctcaaaagattttgttacattgtataaaagaagaaagcatatgagaaaccac 180
Query: 969 agaacacataaatgtgaacattgcgatatgacatttacaggatggatggatctggtcaaa 1028
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 agaacacataaatgtgaacattgccatatgacatttacaggatggatggatctggtcaaa 240
Query: 1029 cacagaagagtagatcatgcatcacctgaatatatttgtaatgattgtggaaaagtattt 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacagaagagtagatcatgcatcacctgaatatatttgtaatgattgtggaaaagtattt 300
Query: 1089 aaagagagatcgcatataataagacatgtaaagaatcacttgccaggaaattcagtaaca 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagagagatcgcatataataagacatgtaaagaatcacttgccaggaaattcagtaaca 360
Query: 1149 gcattcttctgtccctatgaaaattgtcacaggcattactcaaggaacagtaatttaaag 1208
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcattcttctgcccctatgaaaattgtcacaggcattactcaaggaacagtaatttaaag 420
Query: 1209 cagcacattttagtaaagcataaaggtcagacttttgattgtacactctgtggcgcgaaa 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagcacattttagtaaagcataaaggtcagacttttgattgtacactctgtggcgcgaaa 480
Query: 1269 ttaacaacaaaggcccggctaaacgaccacattgatagacatactagaccagaagttata 1328
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 ttaacaacaaaggcccggctaaacgaccacattgatagacatactaggccagaagttata 540
Query: 1329 ttacggataccgaaaacttgtgaaaccggcagaaaaaaaagaaaggatgaaaactctatg 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttacggataccgaaaacttgtgaaaccggcagaaaaaaaagaaaggatgaaaactctatg 600
Query: 1389 aaatatgtcaccgctttgaaattggcgggaatagtaaaaaataaaatggaaaaatgtatc 1448
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatatgtcaccgctttgaagttggcgggaatagtaaaaaataaaatggaaaaatgtatc 660
Query: 1449 gatagcaaaacgatcagagatgacacttaattttttacataaaaa 1493
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatagcaaaacgatcagagatgacacttaattttttacataaaaa 705
>BF14_612_C1
Length = 1638
Score = 329 bits (166), Expect = 1e-89
Identities = 184/190 (96%)
Strand = Plus / Minus
Query: 1 cgacctacacgctgttgcaatgttgtgtaaatgtttgcgttcgaatagtaccagttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cgacctacacgctgttgcaatgttgtgtaaatgtttgcgttcgaatagtaccagttgttt 132
Query: 61 taaacaacgattttgactctattgttatttaactagttgtaaatatatccacactatcaa 120
|||||||||||| ||||| |||||| |||||||||||||||||||||||||||| || ||
Sbjct: 131 taaacaacgattctgactatattgtaatttaactagttgtaaatatatccacaccataaa 72
Query: 121 aaaaattataaaatatagaaagaatatataactaaaacacaactatagaactattatttt 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 71 aaaaattataaaatatagaaagaatatataaccaaaacacaactatagaactattatttt 12
Query: 181 aaaatacaaa 190
||||||||||
Sbjct: 11 aaaatacaaa 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,096
Number of extensions: 6980
Number of successful extensions: 6980
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6980
Number of HSP's successfully gapped: 2
Length of query: 1978
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1961
Effective length of database: 8,119,229
Effective search space: 15921808069
Effective search space used: 15921808069
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)