BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12188 (UTR included)
(3709 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_239_C1 1302 0.0
BF01042A1C06 609 e-173
BF01014A1C07 597 e-170
BF01030A1E10 361 5e-99
>BF14_239_C1
Length = 1217
Score = 1302 bits (657), Expect = 0.0
Identities = 798/855 (93%), Gaps = 45/855 (5%)
Strand = Plus / Plus
Query: 2864 cggcggtctgttgttactggaggcgcggttcacggcggagctgctggcagccctgctaca 2923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cggcggtctgttgttactggaggcgcggttcacggcggagctgctggcagccctgctaca 64
Query: 2924 tataccagcgcacaagacactgttgagaagacatctcacacaaagattcaacgatctgtt 2983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tataccagcgcacaagacactgttgagaagacatctcacacaaagattcaacgatctgtt 124
Query: 2984 gggtcgcgatgttatccagcagaagaggaacgcggaacaaacactcggataccaaccgct 3043
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gggtcgcgacgttatccagcagaagaggaacgcggaacaaacactcggataccaaccgct 184
Query: 3044 cacggccaccaccaagtataaggtgccaaaaaagagtcagttttcattgaagaggaagaa 3103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cacggccaccaccaagtataaggtgccaaaaaagagtcagttttcattgaagaggaagaa 244
Query: 3104 gagtagggacgagctgggagacctcgtgtgtccgctgagagactcag-----------ac 3152
||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 245 gagtagggacgagctgggagacctcgtgtgtccgctgagagactcaggtgacgacactac 304
Query: 3153 gatgagagccaagccagcagtaccggacggcgggtcgggtgtctgtctccagcgtgacga 3212
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 305 gatgagagccaagccagcagtaccggacggcgggtcgggtgtttgtctccagcgtgacga 364
Query: 3213 aactctgtacggatattgatagacggctaagactagtcggttattagcacaagccggctg 3272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aactctgtacggatattgatagacggctaagactagtcggttattagcacaagccggctg 424
Query: 3273 gtaacactagccagctggtaacactagctggctggtaacactagccggctgataacacta 3332
||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 425 -----------------gtaacactagccggctggtgacactagccggctgataacacta 467
Query: 3333 gccggctgataacactagccggctggtaacactagccggctgataacactagtcggctgg 3392
|||| ||||||||||||||| ||||||||||||||| |||||||
Sbjct: 468 gccg-----------------gctggtaacactagctggctgataacactagccggctgg 510
Query: 3393 taacactaatcgaccgctagtgaatccttccgagccggttagatatccgactatagccga 3452
||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 511 taacactaatcgaccactagtgaatcctgccgagccggttagaaatccgactatagccga 570
Query: 3453 tattcatatcgctcgttgtaaactttaacaacaatcgaagtttaacgatgatacattgaa 3512
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 571 tattcatatcgctcgttgtaaactttaacaacaatcgaagtttaaagatgatacattaaa 630
Query: 3513 ctcgacgtgttcatcaaatcaacaataattaatttagtattttatatacatattcttata 3572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctcgacgtgttcatcaaatcaacaataattaatttagtattttatatacatattcttata 690
Query: 3573 tatcgttcttataatggttgctaatttatttttaatattaaaatatattttaagttatac 3632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tatcgttcttataatggttgctaatttatttttaatattaaaatatattttaagttatac 750
Query: 3633 agtcacgtgcgctgttttatactgtctttatcatcgcgttttaatttagaaatcgtatgg 3692
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 agtcacgtgagctgttttatactgtctttatcatcgcgttttaatttagaaatcgtatgg 810
Query: 3693 catcttatttatgta 3707
|||||||||||||||
Sbjct: 811 catcttatttatgta 825
>BF01042A1C06
Length = 715
Score = 609 bits (307), Expect = e-173
Identities = 313/315 (99%)
Strand = Plus / Plus
Query: 1515 aacgatgctgaagacagagtgcggcgcctggaggctgacaaggagagtctccagatgcag 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aacgatgctgaagacagagtgcggcgcctggaggctgacaaggagagtctccagatgcag 460
Query: 1575 gtgcaggtgttgtcagaacagatcgcagcgcagacagagaaaatgtctgatctcgagaga 1634
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 461 gtgcaggtgttgtcagaacagatcgcagcgcagacagagaaaatgtctgacctcgagaga 520
Query: 1635 tcactccacgacaccagacaaaaacttgatgacacggaacagaggttgcaaaaggagatg 1694
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tcactccacgataccagacaaaaacttgatgacacggaacagaggttgcaaaaggagatg 580
Query: 1695 ctacaaaggtcgtcattagagacacagaagttggagttgttatcgaaactgagcgaagtc 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctacaaaggtcgtcattagagacacagaagttggagttgttatcgaaactgagcgaagtc 640
Query: 1755 agactgagggtggctgaacggggcctggtggaaagatctccacccccagaacccgcacca 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agactgagggtggctgaacggggcctggtggaaagatctccacccccagaacccgcacca 700
Query: 1815 gtagcacgacctgcg 1829
|||||||||||||||
Sbjct: 701 gtagcacgacctgcg 715
>BF01014A1C07
Length = 787
Score = 597 bits (301), Expect = e-170
Identities = 307/309 (99%)
Strand = Plus / Plus
Query: 1515 aacgatgctgaagacagagtgcggcgcctggaggctgacaaggagagtctccagatgcag 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aacgatgctgaagacagagtgcggcgcctggaggctgacaaggagagtctccagatgcag 538
Query: 1575 gtgcaggtgttgtcagaacagatcgcagcgcagacagagaaaatgtctgatctcgagaga 1634
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 539 gtgcaggtgttgtcagaacagatcgcagcgcagacagagaaaatgtctgacctcgagaga 598
Query: 1635 tcactccacgacaccagacaaaaacttgatgacacggaacagaggttgcaaaaggagatg 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tcactccacgacaccagacaaaaacttgatgacacggaacagaggttgcaaaaggagatg 658
Query: 1695 ctacaaaggtcgtcattagagacacagaagttggagttgttatcgaaactgagcgaagtc 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ctacaaaggtcgtcattagagacacagaagttggagttgttatcgaaactgagcgaagtc 718
Query: 1755 agactgagggtggctgaacggggcctggtggaaagatctccacccccagaacccgcacca 1814
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 719 agactgagggtggctgaacggggactggtggaaagatctccacccccagaacccgcacca 778
Query: 1815 gtagcacga 1823
|||||||||
Sbjct: 779 gtagcacga 787
>BF01030A1E10
Length = 752
Score = 361 bits (182), Expect = 5e-99
Identities = 194/199 (97%)
Strand = Plus / Plus
Query: 1515 aacgatgctgaagacagagtgcggcgcctggaggctgacaaggagagtctccagatgcag 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aacgatgctgaagacagagtgcggcgcctggaggctgacaaggagagtctccagatgcag 613
Query: 1575 gtgcaggtgttgtcagaacagatcgcagcgcagacagagaaaatgtctgatctcgagaga 1634
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 614 gtgcaggtgttgtcagaacagatcgcagcgcagacagagaaaatgtccgacctcgagaga 673
Query: 1635 tcactccacgacaccagacaaaaacttgatgacacggaacagaggttgcaaaaggagatg 1694
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 674 tcactccacgacaccagacaaaaacttgatgacacggaacagnnnttgcaaaaggagatg 733
Query: 1695 ctacaaaggtcgtcattag 1713
|||||||||||||||||||
Sbjct: 734 ctacaaaggtcgtcattag 752
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,686
Number of extensions: 5273
Number of successful extensions: 5273
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5266
Number of HSP's successfully gapped: 9
Length of query: 3709
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3691
Effective length of database: 8,109,745
Effective search space: 29933068795
Effective search space used: 29933068795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)