BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12199 (UTR included)
(2620 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A1F10 1300 0.0
>BF01037A1F10
Length = 684
Score = 1300 bits (656), Expect = 0.0
Identities = 677/684 (98%)
Strand = Plus / Plus
Query: 406 tgatttagtggtgtggtcagtgtatcagtgaaagtggattaaacagatcttcatgagatg 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatttagtggtgtggtcagtgtatcagtgaaagtggattaaacagatcttcatgagatg 60
Query: 466 tgacaaatttcacgcttaaatcgagttttgagacgatgtctccgtctatgaacaaagtgc 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacaaatttcacgcttaaatcgagttttgagacgatgtctccgtctatgaacaaagtgc 120
Query: 526 cccctgaagggggctatggatgggttgtcactttcgcctatgccttgaacaatgtagttg 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccctgaagggggctatggatgggttgtcactttcgcctatgccttgaacaatgtagttg 180
Query: 586 ttctccctttaatcgccggttttggtttgatttttcaagaagcgtttgacgagacaggct 645
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 ttctccctttaatcgccggttttggtttaatttttcaagaagcgtttgacgagacaggct 240
Query: 646 tgtctgcaacacaagggactctagtcattatactaaaccatggtttcggaatgctgctgt 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtctgcaacacaagggactctagtcattatactaaaccatggtttcggaatgctgctgt 300
Query: 706 cattcttcggcggccctgttcttcgacgttttggttacagaaaagtggcagtcgtcggtg 765
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 cattcttcggcggccctgttcttcgacgttttggatacagaaaagtggcagtcgtcggtg 360
Query: 766 ctttattgattacatccgggcttattctgacctctattgccagcaacttctggatattca 825
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 361 ctttattgattacatccgggcttatactgacctctattgccagcaacttctggatattca 420
Query: 826 tattttcttacagcataataaactcaatgggagttgcagcagtcatggcagccttttctt 885
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 421 tattttcttacagtataataaactcaatgggagttgcagcagtgatggcagccttttctt 480
Query: 886 tggcaataaattcattctttaaagagaaaagaggtcgtgcaattggtgttggcatgtcca 945
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagcaataaattcattctttaaagagaaaagaggtcgtgcaattggtgttggcatgtcca 540
Query: 946 ttacaggtctaggagcaatatatatgccgcttcttatgagtttgcttatgaatacctacg 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttacaggtctaggagcaatatatatgccgcttcttatgagtttgcttatgaatacctacg 600
Query: 1006 gctggaggtacgctgtacttattttaggaggtatttgcctgcattcattattaggtgcgt 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 601 gctggaggtacgctgtacttattttaggaggtatttgcctgcattcattattaggagcgt 660
Query: 1066 gtttacttagaccggcaaaatggt 1089
||||||||||||||||||||||||
Sbjct: 661 gtttacttagaccggcaaaatggt 684
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,101
Number of extensions: 6020
Number of successful extensions: 6020
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6020
Number of HSP's successfully gapped: 1
Length of query: 2620
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2603
Effective length of database: 8,119,229
Effective search space: 21134353087
Effective search space used: 21134353087
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)