BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12223 (UTR included)
(2029 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1G11 1185 0.0
>BF01011B1G11
Length = 630
Score = 1185 bits (598), Expect = 0.0
Identities = 623/630 (98%), Gaps = 1/630 (0%)
Strand = Plus / Plus
Query: 439 gagatctcagttgtttttgacagtcactattatagtaacaaagcaaaaagaagagcaaaa 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagatctcagttgtttttgacagtcactattatagtaacaaagcaaaaagaagagcaaaa 60
Query: 499 taatggatgttaaaaaagaaaagctggaagacaaaaagtttataaaagatgatcatatct 558
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 taatggatgttaaaaaagaaaagctagaagacaaaaagtttataaaagatgatcatatct 120
Query: 559 taacggtgcttttaataacccttgcgataccaatatcaatgtcaatgtggataatgaata 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taacggtgcttttaataacccttgcgataccaatatcaatgtcaatgtggataatgaata 180
Query: 619 taatatattcaaaattattgttaaatactgaaggattagatgatccagtcataatatcac 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatatattcaaaattattgttaaatactgaaggattagatgatccagtcataatatcac 240
Query: 679 ctggaagatggttggcagcctgtctgataccagtaccatttgcattatttggttacaaaa 738
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggaagatggttagcagcctgtctgataccagtaccatttgcattatttggttacaaaa 300
Query: 739 gaaagagtttaaatataagcggagcgttacttggatttatagtggcattcgtattaacac 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaagagtttaaatataagcggagcgttacttggatttatagtggcattcgtattaacac 360
Query: 799 tctcaaacttttgttttttgatcgatatgatggtatttttcttatcatcctcaaaggcaa 858
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 361 tctcaaacttttgttttttgattgatatgatggtgtttttcttatcatcctcaaaggcaa 420
Query: 859 cacattttagacctcaatt-aaaaaaaaagtttgaagcggacttcaaagaaggtggtcaa 917
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacatttcagacctcaattaaaaaaaaaagtttgaagcggacttcaaagaaggtggtcaa 480
Query: 918 agaaattggattcaagttctttgcaatggagggatggcaactcaacttgctttattgtac 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaaattggattcaagttctttgcaatggagggatggcaactcaacttgctttattgtac 540
Query: 978 ttattagatgttggtgcatcggagaagccgattgattttgttaaagattacagatcctca 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttattagatgttggtgcatcggagaagccgattgattttgttaaagattacagatcctca 600
Query: 1038 tggttgagcataggtgtacttggtgttttt 1067
||||||||||||||||||||||| ||||||
Sbjct: 601 tggttgagcataggtgtacttggcgttttt 630
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,080
Number of extensions: 7926
Number of successful extensions: 7926
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7925
Number of HSP's successfully gapped: 1
Length of query: 2029
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2012
Effective length of database: 8,119,229
Effective search space: 16335888748
Effective search space used: 16335888748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)