BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12226 (UTR included)
(2231 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1964_C1 543 e-154
BF01038A2E09 254 5e-67
BF01033A1E02 135 3e-31
>BF14_1964_C1
Length = 573
Score = 543 bits (274), Expect = e-154
Identities = 294/298 (98%), Gaps = 2/298 (0%)
Strand = Plus / Plus
Query: 1935 tggggaaagaaaaatcaattgtatgtaaaatacaatacttgatgtaacttttagaaaaat 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggggaaagaaaaatcaattgtatgtaaaatacaatacttgatgtaacttttagaaaaat 60
Query: 1995 atagatatatatgatgtcttaataatttattgttctttctaatctattgattacattcca 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagatatatatgatgtcttaataatttattgttctttctaatctattgattacattcca 120
Query: 2055 tggattgttgtttaaaaaaaaaatttcgttatactttgattggtatacgtaattaaacga 2114
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 tggattgttgttt-aaaaaaaaatttcgttatactttgattggtatacgtaatgaaacga 179
Query: 2115 atcccaattttccgaaaagtattcc-tttttttttacataaaaaaataaagtcttttttt 2173
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 180 atcccaattttccgaaaagtattccttttttttttacataaaaaaataaagtcttttttt 239
Query: 2174 cttaagtcaagaaacaataattaaatacgtgtagtttacctaaattacataaatattt 2231
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cttaagtcatgaaacaataattaaatacgtgtagtttacctaaattacataaatattt 297
>BF01038A2E09
Length = 820
Score = 254 bits (128), Expect = 5e-67
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 341 aggaggaataccaccacggtgtaacgacgggggagtggcacaggcgtctgatgctgccga 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aggaggaataccaccacggtgtaacgacgggggagtggcacaggcgtctgatgctgccga 748
Query: 401 acaacgaaatggtggtgatgcacggtcccgcggtcatggtacacttcctgcagaccagcc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 acaacgaaatggtggtgatgcacggtcccgcggtcatggtacacttcctgcagaccagcc 808
Query: 461 ccacagac 468
||||||||
Sbjct: 809 ccacagac 816
Score = 230 bits (116), Expect = 8e-60
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 7 ctgacctaaacgaaaatacagttgtagcaacagacgggggtagatttgacgtgaacgtag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ctgacctaaacgaaaatacagttgtagcaacagacgggggtagatttgacgtgaacgtag 635
Query: 67 ttggacgccttagaattccagtatactggtcggagaaaccaacgaacgttatgagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ttggacgccttagaattccagtatactggtcggagaaaccaacgaacgttatgagg 691
>BF01033A1E02
Length = 815
Score = 135 bits (68), Expect = 3e-31
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1358 aggttgggcaagaggagccggagaaggaggagctgacgtcagacgtcaaggaggaggacg 1417
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aggtcgggcaagaggagccggagaaggaggagctgacgtcagacgtcaaggaggaggacg 70
Query: 1418 accgctatgagg 1429
||||||||||||
Sbjct: 71 accgctatgagg 82
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,784
Number of extensions: 8676
Number of successful extensions: 8676
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8674
Number of HSP's successfully gapped: 4
Length of query: 2231
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2214
Effective length of database: 8,119,229
Effective search space: 17975973006
Effective search space used: 17975973006
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)