BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12231 (UTR included)
(1909 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A1B08 654 0.0
BF01047B2G09 214 4e-55
BF01055B2F03 80 1e-14
>BF01044A1B08
Length = 791
Score = 654 bits (330), Expect = 0.0
Identities = 330/330 (100%)
Strand = Plus / Plus
Query: 943 tatacgccgagttggaagcgaccggacagtttgagtttatggacgtacagaccgacgagg 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tatacgccgagttggaagcgaccggacagtttgagtttatggacgtacagaccgacgagg 412
Query: 1003 acgagcattctatagaaatgcatctcccatacatcgccaaagttatggaggaattcaaaa 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acgagcattctatagaaatgcatctcccatacatcgccaaagttatggaggaattcaaaa 472
Query: 1063 cggccttcactatcataccgatcctagtcggttccctatctccggacagggaggcaaaat 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cggccttcactatcataccgatcctagtcggttccctatctccggacagggaggcaaaat 532
Query: 1123 atggtgctatcctagccccgtacctagctgaccctcaaaatctggtggtggtgtcatcag 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 atggtgctatcctagccccgtacctagctgaccctcaaaatctggtggtggtgtcatcag 592
Query: 1183 atttctgccactggggctcaaggttcagatatacttggagagacggcaacaggaacatac 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 atttctgccactggggctcaaggttcagatatacttggagagacggcaacaggaacatac 652
Query: 1243 accaggccatagaatggctggaccatcagg 1272
||||||||||||||||||||||||||||||
Sbjct: 653 accaggccatagaatggctggaccatcagg 682
Score = 509 bits (257), Expect = e-144
Identities = 263/265 (99%)
Strand = Plus / Plus
Query: 567 ggttcagagctgtcgagacagctggacttgtggctatccaaggccgatctgacacacggc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 ggttcagagctgtcgagacagctggacttgtggctatccaaggccgatctgacacacggc 147
Query: 627 ccagccagggccatcatagcaccccacgctggttactcgtactgcggcgcgtgcgcagcg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ccagccagggccatcatagcaccccacgctggttactcgtactgcggcgcgtgcgcagcg 207
Query: 687 ttcgcctacagacaagtcagtcctttagtagttaagcgtatcttcatcctgggaccatct 746
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 208 ttcgcctacagacaagtcagtcctttagtagttaagcgcatcttcatcctgggcccatct 267
Query: 747 catcacgtccgcctgcgaggctgcgctttgtcatccctagataagtacgcgaccccgcta 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 catcacgtccgcctgcgaggctgcgctttgtcatccctagataagtacgcgaccccgcta 327
Query: 807 tacgacctcaccattgataaacaaa 831
|||||||||||||||||||||||||
Sbjct: 328 tacgacctcaccattgataaacaaa 352
>BF01047B2G09
Length = 731
Score = 214 bits (108), Expect = 4e-55
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 943 tatacgccgagttggaagcgaccggacagtttgagtttatggacgtacagaccgacgagg 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tatacgccgagttggaagcgaccggacagtttgagtttatggacgtacagaccgacgagg 110
Query: 1003 acgagcattctatagaaatgcatctcccatacatcgccaaagttatggagga 1054
|||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 acgagcattccatagaaatgcatctcccatacatcgccaaagttatggagga 162
Score = 115 bits (58), Expect = 3e-25
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1055 attcaaaacggccttcactatcataccgatcctagtcggttccctatctccggacaggga 1114
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 408 attcaaaacggcctttactatcataccgatcctagtcggttccctatctccagacaggga 467
Query: 1115 ggcaaa 1120
||||||
Sbjct: 468 ggcaaa 473
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 792 tacgcgaccccgctatacgacctcaccattgataaacaaa 831
||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tacgcgaccccgctatacgacctcaccattgataaacaaa 50
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1121 atatggtgctatcctagccccgtacctagctgaccctc 1158
||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atatggtgctatcctagccccgtacctagctgaccctc 731
>BF01055B2F03
Length = 776
Score = 79.8 bits (40), Expect = 1e-14
Identities = 72/82 (87%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 864 ccattccatagcttgtgtggtatcaggaatcttctgcttcacacggcc---tgttggttc 920
|||||||||||| |||||||| |||||| ||| ||| ||||| |||| |||||||||
Sbjct: 597 ccattccatagcgtgtgtggtgtcaggagtctcctggttcacgcggcgcggtgttggttc 656
Query: 921 cgcggagtcagcggcgtcactc 942
||||||||||||||||||||||
Sbjct: 657 cgcggagtcagcggcgtcactc 678
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,076
Number of extensions: 20461
Number of successful extensions: 20461
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 20460
Number of HSP's successfully gapped: 7
Length of query: 1909
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1892
Effective length of database: 8,119,229
Effective search space: 15361581268
Effective search space used: 15361581268
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)