BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12232 (UTR included)
(1434 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2F04 839 0.0
>BF01050B2F04
Length = 655
Score = 839 bits (423), Expect = 0.0
Identities = 470/486 (96%)
Strand = Plus / Minus
Query: 486 agagccaggagctatcaaaggtgaagatcgacatcgacgagctgcggtccctgtcctcgc 545
||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 520 agagccaagagctgtcaaaggtgaagatcgacatcgacgagttgcggtccctgtcctcgc 461
Query: 546 tcggcatcgacgtggacttcctcaacgagctggagatggccaccaaggactacggcctag 605
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcggcattgacgtggacttcctcaacgagctggagatggccaccaaggactacggcctag 401
Query: 606 gacccgcgcttaaacacacgtacggcctcctcgccgccctcgagaaggagcagcgggaac 665
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 400 gacccgcgcttaaacacnagtacggcctcctcgccgccctcgagaaggagcagcgagaac 341
Query: 666 gtctgtccgcgtcgtctccgtggcacctgtcgctggtggcgggcgcgggccaggcggagc 725
|||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 340 gtctgtccgcgttgtttccgtggcacctgtcgctagtggcgggtgcgggccaggcggagc 281
Query: 726 gcgaggcggcgcgggcggcggcgggctggctgcgggccatggtggccagggtcccgccca 785
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 280 ccgaggcggcgcgggcggcggcgggctggctgcgggccatggtggccagggtccccccca 221
Query: 786 aggaggtcgccacacacgccgccctcaggaacgccatgggcgtcaccctggagcatctcg 845
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 220 aggaggtcgccacacacgccgccctcaggaacgccatgggggtcaccctggagcatctcg 161
Query: 846 acactccgctggccgtggacgacttcgaggagctgcacgagccgcgggactcctccgaca 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 acactccgctggccgtggacgacttcgaggagctgcacgagccgcgggactcctccgaca 101
Query: 906 gggactcgcgctccagcagagacaagtgaccgcccgaaatagattaataaaatattgaga 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 100 gggactcgcgctccagcagagacaagtgaccgcccgaaatagattaataaaatattgggg 41
Query: 966 ctgaaa 971
||||||
Sbjct: 40 ctgaaa 35
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 144,173
Number of extensions: 4255
Number of successful extensions: 4255
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4255
Number of HSP's successfully gapped: 1
Length of query: 1434
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1417
Effective length of database: 8,119,229
Effective search space: 11504947493
Effective search space used: 11504947493
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)