BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12245 (UTR included)
(3220 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B1G05 1312 0.0
BF14_1695_C1 74 2e-12
BF14_729_C3 68 9e-11
>BF01040B1G05
Length = 812
Score = 1312 bits (662), Expect = 0.0
Identities = 740/765 (96%), Gaps = 12/765 (1%)
Strand = Plus / Plus
Query: 2431 cgacagcgtgtcgttgtgtgtgtgagtcgcccgtcaacgagctagtgaagacagcgctcg 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 cgacagcgtgtcgttgtgtgtgtgagtcgcccgtcaacgagctagtgaagacagcgctcg 109
Query: 2491 acagcctcctcgaggcgaccagccagggaaagttgatatacggcgaggctgtgtctacag 2550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 acagcctcctcgaggcgaccagccagggaaagttgatatacggcgaggctgtgtctacag 169
Query: 2551 acgctatacggaattgtctcaaactactgcgccagtggggagtcatagagatgtacacag 2610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acgctatacggaattgtctcaaactactgcgccagtggggagtcatagagatgtacacag 229
Query: 2611 atagtcgcgtgagaaaaataaaaatatgtccaccgtacacgaacaaagacaatctggata 2670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atagtcgcgtgagaaaaataaaaatatgtccaccgtacacgaacaaagacaatctggata 289
Query: 2671 atgtgtgtgccaatgtgtacaagtttaatatggacacgcctttagtttagtgtgagtgaa 2730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atgtgtgtgccaatgtgtacaagtttaatatggacacgcctttagtttagtgtgagtgaa 349
Query: 2731 gtgaagtgacagtgactggtagtgcgggcacattgaaccggtcatataatatattttgat 2790
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 350 gtgaagtgacagtgactggtagtgcgggcacattgaaccggtcatacgttatatttt-tt 408
Query: 2791 gagcgttttgattcatttaattg----------atttttattgatgtttctctgacaagg 2840
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 409 gagcgttttgattcatttaattgatcgctccacatttttattgatgtttctctgacaagg 468
Query: 2841 tgtgtgaatttaatgtgtgacgtcaccaaaacgctgtaactttgataatatacatgaatt 2900
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 469 tgtgtgaatttaatgtgtgacgtcatc-aaacgctgtaactttgataatatacatgaatt 527
Query: 2901 cacttaattggaacacaggattttgtacaatttttcacacaacaaatttgcaggctttac 2960
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 528 cacttaatcggaacacaggattttgtacaatttttcacacaacaaatttgcaggccttac 587
Query: 2961 gcttgggatttaaaggattatctatacctatgcatttattgtgtcagaaataattaaaaa 3020
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gcttgggattttaaggattatctatacctatgcatttattgtgtcagaaataattaaaaa 647
Query: 3021 ctttctacatatgccattttgtgttggctgagttaattattacattggctcggatgttta 3080
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 648 ctttctacgtatgccattttgtgttggctgagttaattattatattggctcggatgttta 707
Query: 3081 tcataactgattcacaactaaagataatatatatacaaatatattatatgaaaaactaaa 3140
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 708 tcataactgattcacaactaaagataatatatatacaaatatattatacgaaaaactaaa 767
Query: 3141 agtatgtaagttgtaatttaaaatgttacattgatttttcattat 3185
|||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 768 agtatgtaagttgtaattaaaaatgttacatttatttttcattat 812
>BF14_1695_C1
Length = 1407
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 306 ttaaatgaatactcgcgaaaatcttagatctcattac 342
|||||||||||||||||||||||||||||||||||||
Sbjct: 1055 ttaaatgaatactcgcgaaaatcttagatctcattac 1019
>BF14_729_C3
Length = 2041
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 306 ttaaatgaatactcgcgaaaatcttagatctcat 339
||||||||||||||||||||||||||||||||||
Sbjct: 1696 ttaaatgaatactcgcgaaaatcttagatctcat 1729
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,783
Number of extensions: 6244
Number of successful extensions: 6244
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6242
Number of HSP's successfully gapped: 4
Length of query: 3220
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3202
Effective length of database: 8,109,745
Effective search space: 25967403490
Effective search space used: 25967403490
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)