BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12257 (UTR included)
(2587 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1691_C1 1637 0.0
>BF14_1691_C1
Length = 842
Score = 1637 bits (826), Expect = 0.0
Identities = 838/842 (99%)
Strand = Plus / Plus
Query: 486 tgtgaattgtccaaaatggctgagacagaaaccgataataacagtattgtaagacctgaa 545
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgacttgtccaaaatggctgagacagaaaccgataataacagtattgtaagacctgaa 60
Query: 546 agaaataacaaaagtatagtgtctaataatgggccccgccgcgttaccatttataaaact 605
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaataataaaagtatagtgtctaataatgggccccgccgcgttaccatttataaaact 120
Query: 606 gagactggttttggttttaacgtccgcggccaagtttctgagggcggacagctgagatcg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagactggttttggttttaacgtccgcggccaagtttctgagggcggacagctgagatcg 180
Query: 666 attaatggggaactttatgcccctctgcagcatgtcagtgctgtattggagcagggagcg 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attaatggggaactttatgcccctctgcagcatgtcagtgctgtattggagcagggagcg 240
Query: 726 gctgagcaggccggtattagaaaaggagatagaatactcgaggttaacggtgtgaatgta 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctgagcaggccggtattagaaaaggagatagaatactcgaggttaacggtgtgaatgta 300
Query: 786 gaaggctccactcacaagcaagtcgttgatctgatcaagtctggaggcgactgtcttacg 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaggctccactcacaagcaagtcgttgatctgatcaagtctggaggcgactgtcttacg 360
Query: 846 ctcaccgtcatctccgtaacaccgaaggaagctgagcgcttagagccttcagacgattca 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcaccgtcatctccgtaacaccgaaggaagctgagcgcttagagccttcagacgattca 420
Query: 906 gcgccggtaggtgtcataggaggtgccgctaactccagggctacggtctaccaaaggtat 965
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 gcgccggtaggtgtcataggaggtgccgctaactccagggctacggtctaccaaagatat 480
Query: 966 gactacacggacaagaggtcgttacccgtctccatacccgactaccgagtggtgatggag 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gactacacggacaagaggtcgttacccgtctccatacccgactaccgagtggtgatggag 540
Query: 1026 cggaacaccggcagatcctacgtagcattcaatgtacacatggccggcagacatctctgt 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggaacaccggcagatcctacgtagcattcaatgtacacatggccggcagacatctctgt 600
Query: 1086 agcagacgctatagagaatttgcagcgctccatcaacaacttaggaaggagtttcttggt 1145
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 601 agcagacgctatagagaatttgcagcgctccatcaacaactaaggaaggagtttcttggt 660
Query: 1146 ttcagcttccccaaactccccggcaagtggcccttcacactcagcgaacaacaactggat 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcagcttccccaaactccccggcaagtggcccttcacactcagcgaacaacaactggat 720
Query: 1206 ggcaggagacgcggcctggaacagtacttagagaaggtgtgtgcaatccgtgtgatagct 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggcaggagacgcggcctggaacagtacttagagaaggtgtgtgcaatccgtgtgatagct 780
Query: 1266 gagagtgacgccgtgcaagagttcctcaccgactgcgacgactcttgcaacccctcgccc 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gagagtgacgccgtgcaagagttcctcaccgactgcgacgactcttgcaacccctcgccc 840
Query: 1326 gt 1327
||
Sbjct: 841 gt 842
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,866
Number of extensions: 5674
Number of successful extensions: 5674
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5674
Number of HSP's successfully gapped: 1
Length of query: 2587
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2570
Effective length of database: 8,119,229
Effective search space: 20866418530
Effective search space used: 20866418530
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)