BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12265 (UTR included)
(1687 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A2E08 801 0.0
>BF01005A2E08
Length = 548
Score = 801 bits (404), Expect = 0.0
Identities = 513/548 (93%), Gaps = 1/548 (0%)
Strand = Plus / Minus
Query: 1087 tggaagccgctaaatatgtaacggtcgaattagttccagagaatgatacacagtcccaga 1146
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tggaagccgctaaatatgtaacggtcgaattagttccagagaatgatacacagtcccagg 489
Query: 1147 ccgtcggaatgttacaggaattatttatttgggatgtttaaatataattaagataagttt 1206
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 488 ccgtcggaatgttacaggaattatttttttgggatgtttaaatataattaacataagttt 429
Query: 1207 tatatttatattcaagagattttttttaagggtaccttgttttttcaactaccttcataa 1266
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 428 tatatttatattcaagagattttttttaagggtcccttgttttttcaactcccttcataa 369
Query: 1267 taaaaaaaa-cgtaggataaaaaaataacaagaaatgttaaatgtattttatatgtgaat 1325
||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 368 taaaaaaaaacgtgggataaaaaaataccaagaaatgttaaatgttttttatatgggaat 309
Query: 1326 tatgtgtttaaaaaaatatatttgttttaattttaatttattttataactaacaagatct 1385
|||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 308 tatgggtttaaaaaaaaaaatttgttttaattttaatttattttataactaacaagattt 249
Query: 1386 ctgtcgtaagtcgcagataataaatattttattttattcattgtatattaaacgtttaaa 1445
||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 248 ttgttgtaagtcgcagataataaaaattttatttttttcattgtatattaaacgtttaaa 189
Query: 1446 tttttacttggctgtcgtaaccattaaacgtaaacgttttacttataaaacataattcaa 1505
||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 188 tttttacttggctgttgtaaccattaaacgtgaacgttttacttttaaaacataattcaa 129
Query: 1506 agcaaatatacgacctctttatttggaaaattgtatatagtaagcgattgagcgataact 1565
||||||| |||| |||| || ||||||||||||||| | |||| |||| || |||||
Sbjct: 128 agcaaatttacgccctcattttttggaaaattgtattttataagggattagccggtaact 69
Query: 1566 tataatttattatccaatgtaatgaatggattttgtttggttgcttaattatattaagtg 1625
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 68 tataatttattttccaatgtaatgaatggattttgtttggttgcttaattatattaaggg 9
Query: 1626 gcaagaat 1633
||||||||
Sbjct: 8 gcaagaat 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 337,031
Number of extensions: 13709
Number of successful extensions: 13709
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13707
Number of HSP's successfully gapped: 1
Length of query: 1687
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1670
Effective length of database: 8,119,229
Effective search space: 13559112430
Effective search space used: 13559112430
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)