BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12277 (UTR included)
(2350 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_196_C2 270 9e-72
BF01013B2C03 226 1e-58
BF14_196_C1 100 2e-20
BF01009B2H03 72 4e-12
>BF14_196_C2
Length = 1961
Score = 270 bits (136), Expect = 9e-72
Identities = 607/764 (79%)
Strand = Plus / Plus
Query: 1014 ccttcacctaaggtgtctgacacagtggtggagccttacaacgcgacgctgtccgtccat 1073
||||| ||||| || || ||||| || || || ||||||||||| || || || || |||
Sbjct: 553 ccttcccctaaagtatcagacaccgtcgtagaaccttacaacgccaccctttcagtacat 612
Query: 1074 cagctcgtggagaacacggacgagaccttctgcatcgacaacgaggcgctctacgacatc 1133
||| | || || || ||||| ||||||| ||| |||||||||||||| || || ||||||
Sbjct: 613 cagttagtagaaaatacggatgagacctactgtatcgacaacgaggctctttatgacatc 672
Query: 1134 tgcttccggaccctgagacttgcaacacccacgtatggtgacctcaaccatttggtgtcg 1193
|||||||| || || | ||| | ||||||||||| || |||||||||||| | ||||||
Sbjct: 673 tgcttccgcacgctaaaactgtccacacccacgtacggcgacctcaaccatctcgtgtcg 732
Query: 1194 ttgactatgtccggagtgaccacttgtctccgattcccgggacagttgaacgcggacctc 1253
| || |||||||| || ||||| || ||| | ||||| || ||||| ||||| ||||||
Sbjct: 733 ctcaccatgtccggtgtcaccacctgcctcaggttccccggtcagttaaacgccgacctc 792
Query: 1254 cgcaagttggccgtcaacatggtgcccttcccacgactgcacttctttatgcccgggttc 1313
||||||||||||||||||||||| |||||||| || || |||||||| |||||||| |||
Sbjct: 793 cgcaagttggccgtcaacatggttcccttcccccgtctccacttcttcatgcccggattc 852
Query: 1314 gctcccctcaccgctcgcaacagccaggagtaccgagcgcttacagttgccgagctcaca 1373
|| ||||| || ||||| ||||||| ||||||| || || || ||| ||||||||||
Sbjct: 853 gcacccctgacatctcgcggcagccagcagtaccgcgccctgaccgttcccgagctcact 912
Query: 1374 cagcagatgttttctcccgtcaacatgatggcggcgtgtgaccctcgccgcggccgttac 1433
||||||||||| || ||||||||||| || || |||||||||| |||||| |||
Sbjct: 913 cagcagatgttcgacgccaagaacatgatggcagcctgcgaccctcgccacggccgctac 972
Query: 1434 ctcaccgtggcagccatcttcagaggacgagtcagcaccaaagaggtggaggaacaaatg 1493
||||||||||| ||||||||| | || || | || || |||||||| || || |||
Sbjct: 973 ctcaccgtggccgccatcttccgtggtcgcatgtccatgaaggaggtggacgagcagatg 1032
Query: 1494 atcagcgctcaggacaagaacagcagctacttcgtcgagtggataccaaataatgtgaag 1553
||| | ||| |||||||| |||||||| || ||||| || || || ||||||
Sbjct: 1033 ctcaacatccagaacaagaactcgtcgtacttcgtggaatggatccccaacaacgtgaag 1092
Query: 1554 gttgctgtgtgtgacgtccctccacgcggcctcaaaatggctgccaccttcgttgggaac 1613
|| ||||| ||| ||||||| ||||| ||||| ||||| ||||||||| | || |||
Sbjct: 1093 accgccgtgtgcgacatccctccccgcggtctcaagatggccgccaccttcatcggcaac 1152
Query: 1614 acgaccgctatacaggaaatattcaaaagaatctctgaacagttcacgttaatgtttagg 1673
| ||||| || || || | ||||| | ||||| || |||||||| ||||| ||
Sbjct: 1153 tccaccgccatccaagagctgttcaagcgcatctcggagcagttcaccgctatgttcaga 1212
Query: 1674 aggaaggccttccttcattggtacacgggcgaggggatggacgagatggagttcaccgag 1733
| ||||| ||||| || |||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 1213 cgcaaggctttcctccactggtacaccggcgagggaatggacgagatggagttcacggag 1272
Query: 1734 gcggaaagcaacatgaacgatctggtctccgagtaccaacagta 1777
||||| |||||||||||||| ||||| ||||||||||| |||||
Sbjct: 1273 gcggagagcaacatgaacgacctggtgtccgagtaccagcagta 1316
Score = 83.8 bits (42), Expect = 1e-15
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 498 aaaatgcgtgaaatagttcatctccaggcgggacagtgcggcaatcagatcggctctaag 557
|||||| | ||||| |||||| ||||||| || || ||||| || |||||||| |||||
Sbjct: 40 aaaatgagggaaatcgttcatatccaggccggccaatgcggaaaccagatcggtgctaag 99
Query: 558 ttctgggagataatatctgacgagcacggcatcgaccc 595
||||||||||| || || ||||||||||||||||||||
Sbjct: 100 ttctgggagatcatctccgacgagcacggcatcgaccc 137
>BF01013B2C03
Length = 831
Score = 226 bits (114), Expect = 1e-58
Identities = 561/710 (79%)
Strand = Plus / Plus
Query: 1068 gtccatcagctcgtggagaacacggacgagaccttctgcatcgacaacgaggcgctctac 1127
||||| |||||||| || ||||| ||||| |||| |||||||||||||||||| || ||
Sbjct: 15 gtccaccagctcgtagaaaacacagacgaaacctactgcatcgacaacgaggctctttat 74
Query: 1128 gacatctgcttccggaccctgagacttgcaacacccacgtatggtgacctcaaccatttg 1187
|||||||||||||| || || | ||| | ||||||||||| || |||||||||||| |
Sbjct: 75 gacatctgcttccgcacgctcaaactgtccacacccacgtacggcgacctcaaccatctc 134
Query: 1188 gtgtcgttgactatgtccggagtgaccacttgtctccgattcccgggacagttgaacgcg 1247
|||||| | || |||||||| || ||||| || ||| | ||||| || |||||||||||
Sbjct: 135 gtgtcgctcaccatgtccggtgtcaccacctgcctcaggttccccggtcagttgaacgcc 194
Query: 1248 gacctccgcaagttggccgtcaacatggtgcccttcccacgactgcacttctttatgccc 1307
|| || ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 195 gatcttcgcaagttggccgtcaacatggttcctttcccccgtctccacttcttcatgccc 254
Query: 1308 gggttcgctcccctcaccgctcgcaacagccaggagtaccgagcgcttacagttgccgag 1367
|| |||||||| ||||| | || |||| | ||||| || || || ||| |||||
Sbjct: 255 ggattcgctcctctcacatcccgtggcagcagacaataccgcgccctgaccgttcccgag 314
Query: 1368 ctcacacagcagatgttttctcccgtcaacatgatggcggcgtgtgaccctcgccgcggc 1427
||||| || |||||||| || ||||||||||| || || |||||||||| ||||
Sbjct: 315 ctcacccaacagatgttcgacgccaagaacatgatggcagcctgcgaccctcgccacggc 374
Query: 1428 cgttacctcaccgtggcagccatcttcagaggacgagtcagcaccaaagaggtggaggaa 1487
|| |||||||||||||| ||||||||| | || || | || || |||||||| ||
Sbjct: 375 cgctacctcaccgtggccgccatcttccgtggtcgcatgtccatgaaggaggtggacgag 434
Query: 1488 caaatgatcagcgctcaggacaagaacagcagctacttcgtcgagtggataccaaataat 1547
|| ||| ||| | ||| |||||||| |||||||| || ||||| || || ||
Sbjct: 435 cagatgctcaacatccagaacaagaactcgtcgtacttcgtggaatggatccccaacaac 494
Query: 1548 gtgaaggttgctgtgtgtgacgtccctccacgcggcctcaaaatggctgccaccttcgtt 1607
|||||| || ||||| ||| ||||||| ||||| ||||| ||||| ||||||||| |
Sbjct: 495 gtgaagaccgccgtgtgcgacatccctccgcgcggtctcaagatggccgccaccttcatc 554
Query: 1608 gggaacacgaccgctatacaggaaatattcaaaagaatctctgaacagttcacgttaatg 1667
|| ||| | ||||| || || || | ||||| | ||||| || |||||||| |||
Sbjct: 555 ggcaactccaccgccatccaagagctgttcaagcgcatctcggagcagttcaccgccatg 614
Query: 1668 tttaggaggaaggccttccttcattggtacacgggcgaggggatggacgagatggagttc 1727
|| || | ||||| ||||| || |||||||| |||||||| ||||||||||||||||||
Sbjct: 615 ttcagacgcaaggctttcctccactggtacaccggcgagggaatggacgagatggagttc 674
Query: 1728 accgaggcggaaagcaacatgaacgatctggtctccgagtaccaacagta 1777
|| |||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 675 acggaggcggagagcaacatgaacgacctggtgtccgagtaccaacagta 724
>BF14_196_C1
Length = 781
Score = 99.6 bits (50), Expect = 2e-20
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 1047 ccttacaacgcgacgctgtccgtccatcagctcgtggagaacacggacgagaccttctgc 1106
||||| ||||| || || || ||||| |||||||| || ||||| ||||| |||| ||||
Sbjct: 589 ccttataacgccactctctcagtccaccagctcgtagaaaacacagacgaaacctactgc 648
Query: 1107 atcgacaacgaggcgctctacgacatctgcttccggaccctgagacttgcaacacccacg 1166
|||||||||||||| || || |||||||||||||| || || | ||| | |||||||||
Sbjct: 649 atcgacaacgaggctctttatgacatctgcttccgcacgctcaaactgtccacacccacg 708
Query: 1167 tatggtgacctcaaccatttggtgtcgttgactatgtccggagtgaccac 1216
|| || |||||||||||| | |||||| | || |||||||| || |||||
Sbjct: 709 tacggcgacctcaaccatctcgtgtcgctcaccatgtccggtgtcaccac 758
>BF01009B2H03
Length = 316
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1395 aacatgatggcggcgtgtgaccctcgccgcggccgttacctcaccgtggcagccatcttc 1454
||||||||||| || || |||||||||| |||||| |||||||||||||| |||||||||
Sbjct: 103 aacatgatggcagcctgcgaccctcgccacggccgctacctcaccgtggccgccatcttc 162
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,283
Number of extensions: 7298
Number of successful extensions: 7298
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7295
Number of HSP's successfully gapped: 9
Length of query: 2350
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2333
Effective length of database: 8,119,229
Effective search space: 18942161257
Effective search space used: 18942161257
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)