BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12300 (UTR included)
(2257 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 151 6e-36
BF14_335_C2 123 1e-27
BF14_335_C4 119 2e-26
BF01049B1F01 107 8e-23
BF01016A2B02 94 1e-18
BF01014B2F02 94 1e-18
BF01044B1A07 90 2e-17
BF01056B2D01 84 1e-15
BF01016B1E06 82 4e-15
BF14_335_C5 82 4e-15
BF01045B1A06 78 7e-14
>BF01019A1H08
Length = 504
Score = 151 bits (76), Expect = 6e-36
Identities = 82/84 (97%)
Strand = Plus / Minus
Query: 570 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaa 629
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 630 cgcgatggacccggcacccgcacg 653
||||||||||||||||||||||||
Sbjct: 420 cgcgatggacccggcacccgcacg 397
>BF14_335_C2
Length = 1827
Score = 123 bits (62), Expect = 1e-27
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 572 cttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaacg 631
|||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 632 cgatggacccggcacccgcacg 653
|| ||||||||||||||||||
Sbjct: 862 cggcggacccggcacccgcacg 841
>BF14_335_C4
Length = 1491
Score = 119 bits (60), Expect = 2e-26
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 570 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaa 629
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 1249 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaa 1307
Query: 630 cgcgatggacccggcacccgcacg 653
|||||||| ||| ||| |||||||
Sbjct: 1308 cgcgatggtccccgcaaccgcacg 1331
>BF01049B1F01
Length = 840
Score = 107 bits (54), Expect = 8e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 570 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaa 629
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 648 cccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 589
Query: 630 cg 631
||
Sbjct: 588 cg 587
>BF01016A2B02
Length = 780
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 572 cttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaacg 631
||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 283 cttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacg 224
Query: 632 cgatggacccggcac 646
|| |||||||||||
Sbjct: 223 cgcgggacccggcac 209
>BF01014B2F02
Length = 623
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/74 (91%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 580 tacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaacgcgatggac 639
|||||||||||||||||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 640 ccggcacccgcacg 653
||||||||||||||
Sbjct: 565 ccggcacccgcacg 552
>BF01044B1A07
Length = 806
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 581 acacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaacgcgatggacc 640
|||||||| |||| |||||||| ||| |||||||||| ||||||||| ||||||||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 641 cggcacccgcacg 653
|| ||||||||||
Sbjct: 472 cgccacccgcacg 460
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 1e-15
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 596 gtcccaggcactgttgaagctcatctccctgcaacgcgatggacccggcacccgcacg 653
||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacg 109
>BF01016B1E06
Length = 606
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 570 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaa 629
|||||||||||||||||||||||| | |||| |||||||||||||||| |||| ||||||
Sbjct: 253 cccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaa 194
Query: 630 c 630
|
Sbjct: 193 c 193
>BF14_335_C5
Length = 1597
Score = 81.8 bits (41), Expect = 4e-15
Identities = 72/83 (86%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 571 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcatctccctgcaac 630
|||||||||||||| |||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaa- 1556
Query: 631 gcgatggacccggcacccgcacg 653
|||| ||||||||||||||||
Sbjct: 1557 -agatgcacccggcacccgcacg 1578
>BF01045B1A06
Length = 820
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 593 caagtcccaggcactgttgaagctcatctccctgcaacgcgatggacccggcacccgca 651
||||||| ||||||||||||||||| |||||||||||| | |||||||| |||||||||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgca 690
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,156
Number of extensions: 20347
Number of successful extensions: 20347
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 20344
Number of HSP's successfully gapped: 11
Length of query: 2257
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2240
Effective length of database: 8,119,229
Effective search space: 18187072960
Effective search space used: 18187072960
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)