BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12306 (UTR included)
(4747 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 153 3e-36
BF14_335_C2 117 2e-25
BF14_335_C4 103 3e-21
BF01014B2F02 96 6e-19
BF01044B1A07 94 2e-18
BF01056B2D01 88 2e-16
BF01049B1F01 86 6e-16
BF01045B1A06 80 4e-14
BF01016A2B02 76 6e-13
BF14_335_C5 76 6e-13
>BF01019A1H08
Length = 504
Score = 153 bits (77), Expect = 3e-36
Identities = 89/93 (95%)
Strand = Plus / Plus
Query: 2139 cctcttagcattcaatggactcactgtgcgggtgccgggtccatcgcgttgcagggagag 2198
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 373 cctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggagag 432
Query: 2199 gagcatcaacagtgcctgggacttgcgacccag 2231
|||| |||||||||||||||| |||||||||||
Sbjct: 433 gagcttcaacagtgcctgggagttgcgacccag 465
>BF14_335_C2
Length = 1827
Score = 117 bits (59), Expect = 2e-25
Identities = 86/95 (90%)
Strand = Plus / Plus
Query: 2133 acgaagcctcttagcattcaatggactcactgtgcgggtgccgggtccatcgcgttgcag 2192
||||| ||||||||| ||| ||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 811 acgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttgcag 870
Query: 2193 ggagaggagcatcaacagtgcctgggacttgcgac 2227
|||||||||| |||||||||||||||| |||||||
Sbjct: 871 ggagaggagcttcaacagtgcctgggatttgcgac 905
>BF14_335_C4
Length = 1491
Score = 103 bits (52), Expect = 3e-21
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 2140 ctcttagcattcaatggactcactgtgcgggtgccgggtccatcgcgttgcagggagagg 2199
|||| ||||||| ||||| |||| |||||| ||| ||| ||||||||||||||| |||||
Sbjct: 1354 ctctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttgcagg-agagg 1296
Query: 2200 agcatcaacagtgcctgggacttgcgacccag 2231
||| ||||||||||||||||||||||||||||
Sbjct: 1295 agcttcaacagtgcctgggacttgcgacccag 1264
>BF01014B2F02
Length = 623
Score = 95.6 bits (48), Expect = 6e-19
Identities = 87/99 (87%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 2133 acgaagcctcttagcattcaatggactcactgtgcgggtgccgggtccatcgcgttgcag 2192
||||| ||||| |||||||| |||| ||| |||||||||||||||||| |||||||||
Sbjct: 522 acgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca--gcgttgcag 579
Query: 2193 ggagaggagcatcaacagtgcctgggacttgcgacccag 2231
|||||||||| ||| ||| |||| |||||||||||||||
Sbjct: 580 ggagaggagcttcagcagcgcctaggacttgcgacccag 618
>BF01044B1A07
Length = 806
Score = 93.7 bits (47), Expect = 2e-18
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 2149 ttcaatggactcactgtgcgggtgccgggtccatcgcgttgcagggagaggagcatcaac 2208
||||||||| |||| ||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 446 ttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagggagaggagcttcaac 505
Query: 2209 agtgcctgggacttgcgacccag 2231
||| |||||||| |||| ||||
Sbjct: 506 tgtgtctgggactcgcgaaccag 528
>BF01056B2D01
Length = 728
Score = 87.7 bits (44), Expect = 2e-16
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 2133 acgaagcctcttagcattcaatggactcactgtgcgggtgccgggtccatcgcgttgcag 2192
||||| ||||| | ||||| ||| | |||| |||||||||||||||||||| | ||||||
Sbjct: 79 acgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgcag 138
Query: 2193 ggagaggagcatcaacagtgcctgggac 2220
|||||||||| ||||||| |||||||||
Sbjct: 139 ggagaggagcttcaacagcgcctgggac 166
>BF01049B1F01
Length = 840
Score = 85.7 bits (43), Expect = 6e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 2185 cgttgcagggagaggagcatcaacagtgcctgggacttgcgacccag 2231
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccag 633
>BF01045B1A06
Length = 820
Score = 79.8 bits (40), Expect = 4e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 2148 attcaatggactcactgtgcgggtgccgggtccatcgcgttgcagggagaggagcatcaa 2207
|||||| ||| |||| ||||||||| |||||||| | ||||||||||||||||| ||||
Sbjct: 673 attcaaaggattcaccatgcgggtgcggggtccattgtgttgcagggagaggagcttcaa 732
Query: 2208 cagtgcctgggacttg 2223
|||||||| |||||||
Sbjct: 733 cagtgccttggacttg 748
>BF01016A2B02
Length = 780
Score = 75.8 bits (38), Expect = 6e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 2170 gtgccgggtccatcgcgttgcagggagaggagcatcaacagtgcctgggacttgcgac 2227
||||||||||| ||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct: 209 gtgccgggtcccgcgcgttgaagggagaggagcttcaacagtgcctgggaattgcgac 266
>BF14_335_C5
Length = 1597
Score = 75.8 bits (38), Expect = 6e-13
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 2154 tggactcactgtgcgggtgccgggtccatcgcgttgcagggagaggagcatcaacagtgc 2213
|||| |||| ||||||||||||||| |||| ||||| |||||||||| ||||||||||
Sbjct: 1587 tggattcaccgtgcgggtgccgggtgcatct--ttgcacggagaggagcttcaacagtgc 1530
Query: 2214 ctgggacttgcga 2226
|||||||||||||
Sbjct: 1529 ctgggacttgcga 1517
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 484,385
Number of extensions: 21804
Number of successful extensions: 21804
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 21801
Number of HSP's successfully gapped: 10
Length of query: 4747
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4729
Effective length of database: 8,109,745
Effective search space: 38350984105
Effective search space used: 38350984105
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)