BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12354 (UTR included)
(2398 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1235_C1 3624 0.0
>BF14_1235_C1
Length = 1958
Score = 3624 bits (1828), Expect = 0.0
Identities = 1901/1925 (98%), Gaps = 9/1925 (0%)
Strand = Plus / Plus
Query: 483 tagagaggttctgtgataatggaattgaattctaataatataaatcacacgcagaccgaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagagaggttctgtgataatggaattgaattctaataatataaatcacacgcagaccgaa 61
Query: 543 cttgatttcgatccgagtaagcctccgccgcagcctccgccgtatgtgaaagcaaagaga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cttgatttcgatccgagtaagcctccgccgcagcctccgccgtatgtgaaagcaaagaga 121
Query: 603 tttgtgcttcacccagaaaaagatacatttgacttcgtaaaggagagacaaatccgaaga 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttgtgcttcacccagaaaaagatacatttgacttcgtaaaggagagacaaatccgaaga 181
Query: 663 cctactaatactatagaatcaacggggcatcttataaaaggctgtctcggaggaggtatt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cctactaatactatagaatcaacggggcatcttataaaaggctgtctcggaggaggtatt 241
Query: 723 ctgggtattcatgaggcctatatgaaatctgggctatggacgtctttatttataacagtg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctgggtattcatgaggcctatatgaaatctgggctatggacgtctttatttataacagtg 301
Query: 783 attttcgggttttatatagcgtactgcatgcatatactagtaaagtcagctcaaacctta 842
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 302 attttcgggttttatatagcgtactgcatgcatatactagtaaagtccgctcaaacctta 361
Query: 843 tataagaggctgcatctcacggagatgtcatacccagacttagctgaagcgtcgttggaa 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tataagaggctgcatctcacggagatgtcatacccagacttagctgaagcgtcgttggaa 421
Query: 903 gtaggtccatttccaaaattaagaaaatacagcaaaatatttagatatgctgtcgacaca 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtaggtccatttccaaaattaagaaaatacagcaaaatatttagatatgctgtcgacaca 481
Query: 963 gtaatttgtatagacctattcggagcttgttgcgtgtatcaaataatcatcgctaaaaca 1022
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 482 gtaatttgtatagacctattcggagcttgttgcgtgtaccaaataatcatcgctaaaaca 541
Query: 1023 atcaaagaagttgtagaggccagtacagaagagcaacaatatgacttaaaccgcctgaga 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atcaaagaagttgtagaggccagtacagaagagcaacaatatgacttaaaccgcctgaga 601
Query: 1083 ctgtatattttcgctctactcatacctgtgttattgctttgtatgataaccacattgaaa 1142
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctgtatatattcgctctactcatacctgtgttattgctttgtatgataaccacattgaaa 661
Query: 1143 tatttggcaccattcacattaattgctgatgtttttattgtcgcgtgtgttgtcgcaacg 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tatttggcaccattcacattaattgctgatgtttttattgtcgcgtgtgttgtcgcaacg 721
Query: 1203 atatactatggatataaatccgctccgccgttggcttcagtaccagcttggaaggacggc 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atatactatggatataaatccgctccgccgttggcttcagtaccagcttggaaggacggc 781
Query: 1263 attggtttctttgaattctgcggcatcgtagtcttcagtatggagggtataggagtttct 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 attggtttctttgaattctgcggcatcgtagtcttcagtatggagggtataggagtttct 841
Query: 1323 ttgccaatagagaataatatgaaagaacctgagaagtttccgaagatacttgctgcgggt 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ttgccaatagagaataatatgaaagaacctgagaagtttccgaagatacttgctgcgggt 901
Query: 1383 atgtgcgtggtcgtattattcttaatgctcgtcggattctttggttattggggcttcgga 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 atgtgcgtggtcgtattattcttaatgctcgtcggattctttggttattggggcttcgga 961
Query: 1443 gagaattccatatcgccggttacattgaattttcccaccgaaatttttccaaccgtcctg 1502
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gagaattccatatcgccggttacattgaattttcccaccgaaatttttccaaccgtccta 1021
Query: 1503 aaatgtttgatgggggtgatgattttcataacgttcgctctaaacttctgggcgcccttc 1562
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 1022 aaatgtttgatgggggtgatgattttcataaccttcgctctaaacttctgggcccccttc 1081
Query: 1563 aatctggtgtggtattacgtgtcaaagaaacacagtccaaagaaatactggctttgggaa 1622
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 aatctagtgtggtattacgtgtcaaagaaacacagtccaaagaaatactggctttgggaa 1141
Query: 1623 cgcgtatataggtccatattcgtgattgcgatcacagccattgcaatcgccttcccgaat 1682
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 cgcgtatacagatccatattcgtgattgcgatcacagccattgcaatcgccttcccgaat 1201
Query: 1683 atcggtaatctgatgggactgctgggtgcgttttgcctatcaaatatgggtttcattttc 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 atcggtaatctgatgggactgctgggtgcgttttgcctatcaaatatgggtttcattttc 1261
Query: 1743 ccggcgtttatagagctgttggttatctgggagagccctggcctcggcaggctgtactgg 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 ccggcgtttatagagctgttggttatctgggagagccctggcctcggcaggctgtactgg 1321
Query: 1803 agattttggaagaacattttcgttatactgataggagtgttgttattcgtcgctggcaca 1862
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1322 agattttggaagaacattttcgttatactgataggagtgttgttattcgtcgctggtaca 1381
Query: 1863 tattctaatgtaaagggcctgataaatagtttgtaattaggttatacaatagttatttta 1922
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 tattctaacgtaaagggcctgataaatagtttgtaattaggttatacaatagttatttta 1441
Query: 1923 atttatttttataccaaatagatttattttaaactggacatagcttcacccgagcataag 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 atttatttttataccaaatagatttattttaaactggacatagcttcacccgagcataag 1501
Query: 1983 ttacttttacaata----tatatgcatataaaaatatatatattttctaatataaaagta 2038
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 ttacttttacaatatatgtatatgcatataaaaatatatatattttctaatataaaagta 1561
Query: 2039 gattaagttactccttataacatcagctggtctattgaaatcacaactaaatcggtgtaa 2098
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 gattaagttactccttataacatcagctggtctattgaaatcacaactaaatcggtgtag 1621
Query: 2099 ccgttccagagattagtaggaacaaacatacgtacaaatattgtaaatgtcatatttgta 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 ccgttccagagattagtaggaacaaacatacgtacaaatattgtaaatgtcatatttgta 1681
Query: 2159 aacattcatgccaaaaa-----atatatatatattatttttactatttatataaattcct 2213
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 aacattcatgccaaaaatatatatatatatatattatttttactatttatataaattcct 1741
Query: 2214 tagagtatgacacatacgatttaattttcttagcttcatcattcacgctttctttttaat 2273
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 tagagtatcacacatacgatttaattttcttagcttcatcattcacgctttctttttaat 1801
Query: 2274 taataattcaagcagtaattactttacattatataaattatagataaaataaaacagcaa 2333
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 taataattcaagcagtaattactttacattatataaattatagataaaataaaacagcag 1861
Query: 2334 atacaaataaataatttattatatctataaacgctatttcgttaattttagttttattat 2393
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1862 atacaaataaataatttattatatctataaacgctatttcgttaatttaagttttattat 1921
Query: 2394 actgt 2398
|||||
Sbjct: 1922 actgt 1926
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 368,045
Number of extensions: 13618
Number of successful extensions: 13618
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13611
Number of HSP's successfully gapped: 1
Length of query: 2398
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2381
Effective length of database: 8,119,229
Effective search space: 19331884249
Effective search space used: 19331884249
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)