BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12369 (UTR included)
(2599 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1A11 1029 0.0
>BF01030A1A11
Length = 556
Score = 1029 bits (519), Expect = 0.0
Identities = 525/527 (99%)
Strand = Plus / Plus
Query: 2073 ccccttagccctggcgaggaggattgaggttcggcgcgcggctggccgtatccccacgcc 2132
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ccccttagccctggcgaggaggattgaggttcggtgcgcggctggccgtatccccacgcc 60
Query: 2133 gcgcccctcccccctcatccctcccaccatccgtggtaatctggaaacttccagaacgtt 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgcccctcccccctcatccctcccaccatccgtggtaatctggaaacttccagaacgtt 120
Query: 2193 caagaagcgcacaaaagcttcgagaactcctcattttcaggactgtcgctgaagccagtg 2252
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagaagcacacaaaagcttcgagaactcctcattttcaggactgtcgctgaagccagtg 180
Query: 2253 ttgctcggatctctctcgttcttatcattgagattattccattagtgaattaagatcgat 2312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgctcggatctctctcgttcttatcattgagattattccattagtgaattaagatcgat 240
Query: 2313 tcttgtaaactcttctcgtaggcacatagttgtactgaaatgtgccaaaatgtcttttta 2372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttgtaaactcttctcgtaggcacatagttgtactgaaatgtgccaaaatgtcttttta 300
Query: 2373 gacgattagaaaaatgtaaataataagttaaattgttatattcatctgatatcaatgtaa 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacgattagaaaaatgtaaataataagttaaattgttatattcatctgatatcaatgtaa 360
Query: 2433 atatttgagtaacactctgtagatatgaatgcacgtatcgatgtttggctaaaattaatt 2492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atatttgagtaacactctgtagatatgaatgcacgtatcgatgtttggctaaaattaatt 420
Query: 2493 atctgtagtacaatagtttacatatagtttaaagttatttaagtgttaggatccggagtt 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atctgtagtacaatagtttacatatagtttaaagttatttaagtgttaggatccggagtt 480
Query: 2553 tacttttttgtggccatgtataaattttagttgaactatttactttt 2599
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacttttttgtggccatgtataaattttagttgaactatttactttt 527
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,935
Number of extensions: 4297
Number of successful extensions: 4297
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4297
Number of HSP's successfully gapped: 1
Length of query: 2599
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2582
Effective length of database: 8,119,229
Effective search space: 20963849278
Effective search space used: 20963849278
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)