BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN12377 (UTR included)
         (1657 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01019B1G10                                                           78   5e-14
BF14_729_C3                                                            74   8e-13

>BF01019B1G10
          Length = 488

 Score = 77.8 bits (39), Expect = 5e-14
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1239 atctcgtctgtccgtggtcacggttgctgctaaggaaccgaaacgtccgtagtatgtaat 1298
            ||||| |||| ||||| |||||||| |||  |||||||||||||||| | | |||||| |
Sbjct: 404  atctcatctgcccgtgatcacggttactgaaaaggaaccgaaacgtcgggattatgtagt 345

                                   
Query: 1299 ttttaaaataataaaatacgcgt 1321
            ||||||||||||||||| |||||
Sbjct: 344  ttttaaaataataaaattcgcgt 322


>BF14_729_C3
          Length = 2041

 Score = 73.8 bits (37), Expect = 8e-13
 Identities = 71/81 (87%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1241 ctcgtctgtccgtggtcacggttgctgctaaggaaccgaaacgtccgtagtatgtaattt 1300
            |||||||| ||||| ||||||||||||| ||| |||||||||||| | | |||||| |||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1648

                                 
Query: 1301 ttaaaataataaaatacgcgt 1321
            || |||||||||||| |||||
Sbjct: 1649 tt-aaataataaaatccgcgt 1668


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,954
Number of extensions: 10535
Number of successful extensions: 10535
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10534
Number of HSP's successfully gapped: 2
Length of query: 1657
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1640
Effective length of database: 8,119,229
Effective search space: 13315535560
Effective search space used: 13315535560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)