BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12425 (UTR included)
(2446 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A2F06 648 0.0
BF01039A2C03 76 3e-13
>BF01055A2F06
Length = 787
Score = 648 bits (327), Expect = 0.0
Identities = 342/347 (98%)
Strand = Plus / Plus
Query: 1680 aggcaatagcccaatgcctatcgaaagcgggggtctgcaaatctgccagggggaactacg 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aggcaatagcccaatgcctatcgaaagcgggggtctgcaaatctgccagggggaactacg 238
Query: 1740 tgttagtagaggaggtaccatcgagaactcctacacagagggtcctagctcctcacgaga 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgttagtagaggaggtaccatcgagaactcctacacagagggtcctagctcctcacgaga 298
Query: 1800 gggtcttgaaaactacctccagacctggagccaaactgctccttaagagagttggtgatg 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gggtcttgaaaactacctccagacctggagccaaactgctccttaagagagttggtgatg 358
Query: 1860 atcccagcagcagggcgtggctcactagcatcagatccgcgtcaacagatcgtcctcgag 1919
|||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||
Sbjct: 359 atcccagcagcagggcgtggctaacaagcatcaggtccgcgtcaacagatcgtcctcgag 418
Query: 1920 acaccgtaccctcggacgaagagtcccaggagcagcgcaaaccagacagcttcctcgtct 1979
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 419 acaccgtaccctcggacgaagagtcccaggagcagcgcaagccagacagcttcctcgtct 478
Query: 1980 gcatccacaacgtctgccatgagataccgtatgcgatactaaaggta 2026
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 479 gcatccacaacgtctgccatgagataccgtatgccatactaaaggta 525
Score = 127 bits (64), Expect = 9e-29
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 1619 gcggtggtgctccacgaaccttactccatattgaaggtcactcaagataccaccacaaac 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggtggtgctccacgaaccttactccatattgaaggtcactcaagataccaccacaaac 60
Query: 1679 gagg 1682
||||
Sbjct: 61 gagg 64
>BF01039A2C03
Length = 818
Score = 75.8 bits (38), Expect = 3e-13
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 65 attttaaatgttcagcgtcactttcagttatatcctacaaaatggctgaagccagtattt 124
||||| |||||||||| | ||| |||| || ||||||||||||||| | | ||||||||
Sbjct: 278 atttttaatgttcagcatttcttccagtaatgtcctacaaaatggctaaggtcagtattt 219
Query: 125 attgttttcaaacacaagttgatacctaaatgtt 158
|| ||||||||| ||||||| |||| ||||||||
Sbjct: 218 atagttttcaaatacaagttcatacttaaatgtt 185
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 185,462
Number of extensions: 3015
Number of successful extensions: 3015
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3015
Number of HSP's successfully gapped: 3
Length of query: 2446
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2429
Effective length of database: 8,119,229
Effective search space: 19721607241
Effective search space used: 19721607241
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)