BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12436 (UTR included)
(2776 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A1D12 751 0.0
>BF01014A1D12
Length = 688
Score = 751 bits (379), Expect = 0.0
Identities = 404/411 (98%), Gaps = 1/411 (0%)
Strand = Plus / Plus
Query: 2366 attcagcacaatggatattgtgatgtcctcatacaaagaataaccttacataacaattct 2425
||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1 attcagcacgatggatattgtgatgtcctcatacatagaataaccttacataataattct 60
Query: 2426 tacagatggattgctatatgagataatttgattttggaaaaaagttgtatgaatggactg 2485
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 tacagatggattgctatatgagataatttgattttggaaaa-agttgtatgaatggactg 119
Query: 2486 aaaaggttttatatttaccaacaaaaccataccaagatttaatcggattataatatatac 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aaaaggttttatatttaccaacaaaaccataccaagatttaatcggattataatatatac 179
Query: 2546 gggaaatgtctatttttgttgtcaacactctttgacctctttatatctcataatataaaa 2605
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 180 gggaaatgtctatttttgttgtcaacactctttgacctctttatatctgataatataaaa 239
Query: 2606 taatagactccgcttcatattttcagatgattacaaaagacctttgccactttcacttta 2665
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 240 taatagactccgcttcatattttcagatgattacaaaagacctttgccactttcacatta 299
Query: 2666 tcaatattgccaacataaaaaacttaatattgccaacttgtttgtatttttgcacttgta 2725
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcaatattgccaacataaaaaatttaatattgccaacttgtttgtatttttgcacttgta 359
Query: 2726 catgaatttaacgaaaacgtgtctaatacctcatattttagagtacactat 2776
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 catgaatttaacgaaaacgtgtctaatacctcatattttagagtacactat 410
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,739
Number of extensions: 5379
Number of successful extensions: 5379
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5376
Number of HSP's successfully gapped: 1
Length of query: 2776
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2759
Effective length of database: 8,119,229
Effective search space: 22400952811
Effective search space used: 22400952811
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)