BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12444 (UTR included)
(1957 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B1E02 1368 0.0
>BF01030B1E02
Length = 706
Score = 1368 bits (690), Expect = 0.0
Identities = 702/706 (99%)
Strand = Plus / Plus
Query: 828 aagctcgtcgccaacattttatcagtgtctggggccgatcatataataacaatggacctt 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctcgtcgccaacattttatcagtgtctggggccgatcatataataacaatggacctt 60
Query: 888 cacgcgtcacagattcaaggtttctttgatatccccgtcgataacctattcgccgagccg 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacgcgtcacagattcaaggtttctttgatatccccgtcgataacctattcgccgagccg 120
Query: 948 gcggtgttgaaatggatcaaggaaaacataccggactggaaaacaagtatcgtagtatcc 1007
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 gcggtgttgaaatggatcaaggaaaacataccggactggaaaacaagtatcgtagtctcc 180
Query: 1008 cccgacgccggtggtgctaaaagagtgacgtccatcgctgatagattgaatgtagaattc 1067
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 cccgacgccggtggtgctaaaagagtgacgtccattgctgatagattgaatgtagaattc 240
Query: 1068 gctcttatccataaagaacggaaaaaagctaacgaagtcgcctcaatggtgttagttggt 1127
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctctcatccataaagaacggaaaaaagctaacgaagtcgcctcaatggtgttagttggt 300
Query: 1128 gatgtgaaagaccgcacagctattctagttgatgacatggcggatacttgcgggacaatc 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgtgaaagaccgcacagctattctagttgatgacatggcggatacttgcgggacaatc 360
Query: 1188 tgtcatgctgccgagaaattaattgaagccggggctactaaagtttatgctatactaact 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtcatgctgccgagaaattaattgaagccggggctactaaagtttatgctatactaact 420
Query: 1248 cacggaatcttctctggcccagctatttctcggattaacaatgcctgtctagaggctgta 1307
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacggaatcttctctggcccagccatttctcggattaacaatgcctgtctagaggctgta 480
Query: 1308 gtggtaacaaatacaattccccaagaaaggcatatgcaggattgtcctaaaatccaatgc 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtggtaacaaatacaattccccaagaaaggcatatgcaggattgtcctaaaatccaatgc 540
Query: 1368 atcgatgtgtccatgatgcttgccgaggctgtccgacgtacacacaacggcgaatcagtt 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcgatgtgtccatgatgcttgccgaggctgtccgacgtacacacaacggcgaatcagtt 600
Query: 1428 tcatacttgttttctaatgttccatattagttatactactttttatacttaatattaggg 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcatacttgttttctaatgttccatattagttatactactttttatacttaatattaggg 660
Query: 1488 tatggtctccgacatcataaagatccaattgacacaattatcactg 1533
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatggtctccgacatcataaagatccaattgacacaattatcactg 706
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,477
Number of extensions: 4267
Number of successful extensions: 4267
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4267
Number of HSP's successfully gapped: 1
Length of query: 1957
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1940
Effective length of database: 8,119,229
Effective search space: 15751304260
Effective search space used: 15751304260
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)