BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12447 (UTR included)
(1366 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2658_C1 728 0.0
BF01039A2C03 86 2e-16
>BF14_2658_C1
Length = 568
Score = 728 bits (367), Expect = 0.0
Identities = 370/371 (99%)
Strand = Plus / Plus
Query: 514 ttgagatcgcagttggtctgcgaaaaggccacaaaaccaccaaaatatctgctggcaaaa 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagatcgcagttggtctgcgaaaaggccacaaaaccaccaaaatatctgctggcaaaa 60
Query: 574 aaggtatcacagacaaagccatcagaatcagacccgcaagactaaagggtcttcaaacaa 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggtatcacagacaaagccatcagaatcagacccgcaagactaaagggtcttcaaacaa 120
Query: 634 agcactccaagttcgtccgcgacctggtcagagaagtcgttggtcatgctccttacgaga 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcactccaagttcgtccgcgacctggtcagagaagtcgttggtcatgctccttacgaga 180
Query: 694 agagagctatggagttgcttaaggtatcgaaggacaagcgcgctctcaagttcttgaagc 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagagctatggagttgcttaaggtatcgaaggacaagcgcgctctcaagttcttgaagc 240
Query: 754 gtcgcctcggtacacacatccgggctaagaggaagcgtgaggagatgagcaacgttttgg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcgcctcggtacacacatccgggctaagaggaagcgtgaggagatgagcaacgttttgg 300
Query: 814 tacagatgaggaaggccgctgcacaggcccatcacgccacacacgcccattaataaatat 873
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 301 tacagatgaggaaggccgctgcacaggcccaccacgccacacacgcccattaataaatat 360
Query: 874 attatactata 884
|||||||||||
Sbjct: 361 attatactata 371
>BF01039A2C03
Length = 818
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1226 taattttgtaatggcaacatttaagtatcaactcgtttttgaaaac--taaatactggct 1283
||||||||||| |||||||||||||||| |||| || ||||||||| ||||||||| |
Sbjct: 170 taattttgtaagggcaacatttaagtatgaacttgtatttgaaaactataaatactgacc 229
Query: 1284 tcagccattttgtaagacattactgg 1309
| |||||||||||| |||||||||||
Sbjct: 230 ttagccattttgtaggacattactgg 255
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,298
Number of extensions: 5279
Number of successful extensions: 5279
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5278
Number of HSP's successfully gapped: 2
Length of query: 1366
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1349
Effective length of database: 8,119,229
Effective search space: 10952839921
Effective search space used: 10952839921
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)