BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12459 (UTR included)
(2095 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2F03 218 3e-56
BF01029A1A09 196 1e-49
>BF01055B2F03
Length = 776
Score = 218 bits (110), Expect = 3e-56
Identities = 177/198 (89%), Gaps = 1/198 (0%)
Strand = Plus / Plus
Query: 209 agactacatgattgccccgatgttaggatagcaatcccattccatagcttgtttggtatc 268
||||||| |||||||||||| || || ||||| || |||||||||||| ||| |||| ||
Sbjct: 561 agactacttgattgccccgacgtaagcatagccatgccattccatagcgtgtgtggtgtc 620
Query: 269 aggaatcttctggttcacacggcttggtgttcgttccgcggagtcagcggcgttacttgt 328
|||| ||| ||||||||| |||| |||||| ||||||||||||||||||||| ||| ||
Sbjct: 621 aggagtctcctggttcacgcggcgcggtgttggttccgcggagtcagcggcgtcactcgt 680
Query: 329 tatatgatatcttatccatacaacgatgttgccccggcgatgttcatttattttataata 388
|||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 681 tatatgatattctatccatacagcgatgtt-ccccggcgatgttcatttattttataata 739
Query: 389 tgtagcgcgtacgtaaca 406
||||||||||||||||||
Sbjct: 740 tgtagcgcgtacgtaaca 757
>BF01029A1A09
Length = 732
Score = 196 bits (99), Expect = 1e-49
Identities = 111/114 (97%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 107 aattatataaggtggcaaccggaggttccaggaaaactacgaaacttacttatatgtata 166
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 114 aattatataaggtggcaaccggaggttccaggaaaactacgaaacatacttatatgtata 55
Query: 167 ttataata--aaaattacatattaaaacttataacctatacctaagactacatg 218
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 ttataataaaaaaattacatattaaaacttataacctatacctaagactacatg 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,560
Number of extensions: 4864
Number of successful extensions: 4864
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4862
Number of HSP's successfully gapped: 2
Length of query: 2095
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2078
Effective length of database: 8,119,229
Effective search space: 16871757862
Effective search space used: 16871757862
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)