BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12482 (UTR included)
(2308 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3111_C1 1392 0.0
>BF14_3111_C1
Length = 753
Score = 1392 bits (702), Expect = 0.0
Identities = 742/754 (98%), Gaps = 1/754 (0%)
Strand = Plus / Plus
Query: 369 gcataaggcgatcttcggtttttaaatcaaattttaatttgaaagtgtatattttatttt 428
||||||| ||||||||||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 1 gcataagacgatcttcggttta-aaatcaaattttaatttgaaagtgtatatattttttt 59
Query: 429 agaatgaatttttttaaaagtttgtttttaatttggacgtgtttctttaattccggtgtt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 agaatgaatttttttaaaagtttgtttttaatttggacgtgtttctttaattccggtgtt 119
Query: 489 ctaacacattggatgacgactgatgaacttgaaaaccacataagtccggaagacctagaa 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctaacacattggatgacgactgatgaacttgaaaaccacataagtccggaagacctagaa 179
Query: 549 gagttcctcaaatggtgcaaaaataatactgcaacagaaatttccccgaatcatgatgtc 608
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 180 gagttcctcaaatggtgcaaaaataatactgcaacacaaatttccccgaatcacgatgtc 239
Query: 609 gattacgctagtttcgaggatacgaccacaatcctccccgtaccagaaacagtggactgt 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gattacgctagtttcgaggatacgaccacaatcctccccgtaccagaaacagtggactgt 299
Query: 669 ttcggcttgggcagcctcgttggttttttcaacatgaggccggactcttcaaatgacgtc 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttcggcttgggcagcctcgttggttttttcaacatgaggccggactcttcaaatgacgtc 359
Query: 729 aatactcatttttatttttcatctcgtcaaaaaccggatagagtacaggtttatccagga 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aatactcatttttatttttcatctcgtcaaaaaccggatagagtacaggtttatccagga 419
Query: 789 acacagtttggtctggagtgggtggattttaggccggacagaaggaccatattgattgtc 848
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 420 acacagtttggtctggagtgggtggattttaggccggacagaaggaccgtattgattgtc 479
Query: 849 catggcttcatgagccacagcaacgcgtcctgggttttggacatgacgcgggcgttttta 908
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 480 catggcttcatgagccacagcaacgcgtcctgggttttggacatgacgcgagcattttta 539
Query: 909 gaatggagggatgtgaacgtgatagctgtggattggagtaaaggtggcaacacttggaag 968
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 540 gaatggagggatgtgaacgtgatagctgttgattggagtaaaggtggcaacacttggaag 599
Query: 969 tattggagagcagtggccaatactaggagagtaggatctgatgttgttgggttcatgaaa 1028
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 600 tattggagagcagtggccaataccaggagagtaggatctgatgttgttgggttcatgaaa 659
Query: 1029 cagcttatgacggcgactggtgctaatgttaaggatttccatttcataggtcacagtctc 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cagcttatgacggcgactggtgctaatgttaaggatttccatttcataggtcacagtctc 719
Query: 1089 ggcgctcacatcgtgtcctacgtgtcttatcata 1122
||||||||||||||||||||||||||||||||||
Sbjct: 720 ggcgctcacatcgtgtcctacgtgtcttatcata 753
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,116
Number of extensions: 7703
Number of successful extensions: 7703
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7702
Number of HSP's successfully gapped: 1
Length of query: 2308
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2291
Effective length of database: 8,119,229
Effective search space: 18601153639
Effective search space used: 18601153639
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)