BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12505 (UTR included)
(1438 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2373_C1 1344 0.0
BF14_1076_C1 232 1e-60
>BF14_2373_C1
Length = 758
Score = 1344 bits (678), Expect = 0.0
Identities = 726/742 (97%)
Strand = Plus / Plus
Query: 393 attctacgagaaaaattatagaattgatacatatgtatattataatgtaataaaaccgtg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 attctacgagaaaaattatagaattgatacatatgtatattataatgtaataaaaccgtg 76
Query: 453 tataactgaagtaaatattctttaattttatagtcttaagagtacaaaatgacaatttat 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tataactgaagtaaatattctttaattttatagtcttaagagtacaaaatgacaatttat 136
Query: 513 aatttatatatatttgatcgctatggtactttactgtactatggggaatggaacagaact 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aatttatatatatttgatcgctatggtactttactgtactatggggaatggaacagaact 196
Query: 573 aaacaagcgggaatgtcgcgagaggaggaaggaaaactaatgtacggaatgctcttttca 632
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 197 aaacaagcgggaatgtcgcgagaggaggaagggaaactaatgtacggaatgctcttttca 256
Query: 633 atcaaatcatttgttgccaaaatatcgccactagatcccaaagatggtttcctgaactac 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atcaaatcatttgttgccaaaatatcgccactagatcccaaagatggtttcctgaactac 316
Query: 693 aaaacatctaaatatacattgcattatttagaaactccttcaggattaaagtttgttatg 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaaacatctaaatatacattgcattatttagaaactccttcaggattaaagtttgttatg 376
Query: 753 aacacagataaccaagtgcagggagtcagagaattgttaaagaaaatatatgcagagatc 812
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aacacagacaaccaagtgcaaggagtcagagaattgttaaagaaaatatatgcagagatc 436
Query: 813 tacgttaaatatataactaggaaccctttgtgcggaatcggtgaacccataacaagtgaa 872
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tacgtaaaatatataactaggaaccctttgtgcggaatcggtgaacccataacaagtgaa 496
Query: 873 ctcttcaaaactaaactggatgcattcatcaaacaagcaccgttcgccgcagcacgggca 932
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 497 ctcttcaaaactaaactggatgcattcatcaaacaagcaccgttcaccgcagcacgggca 556
Query: 933 tcttgataaatgtattatgataaaattaatttaagaactattaagatataactttgtgta 992
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 557 tcttgataaatatattatgataaaattaatttaagaactattaacatataactttgtgta 616
Query: 993 tataaataaacttataaacatcttcacaactcgtattattttgttattgcattcttttct 1052
|||||||||||||||||||||| ||| ||||| ||||||||||||||||||| |||||
Sbjct: 617 tataaataaacttataaacatcatcagaactcaaattattttgttattgcatttgtttct 676
Query: 1053 ggactccaaaatcattattatacacaacatatatttcctggctgatattaaaaaagcttt 1112
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggactccaaagtcattattataatcaacatatatttcctggctgatattaaaaaagcttt 736
Query: 1113 gttactatacaaagtatacatt 1134
||||||||||||||||||||||
Sbjct: 737 gttactatacaaagtatacatt 758
>BF14_1076_C1
Length = 893
Score = 232 bits (117), Expect = 1e-60
Identities = 120/121 (99%)
Strand = Plus / Minus
Query: 1 gtattactatttttggtatagctactggtggtcacttttgattttgtaaattttcgatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtattactatttttggtatagctactggtggtcacttttgattttgtaaattttcgatat 62
Query: 61 attactattttacatcatctttcgcacttcttttacagtaagagacaaggttgaaggtct 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 attactattttacatcatctttcgcacttcttttaccgtaagagacaaggttgaaggtct 2
Query: 121 a 121
|
Sbjct: 1 a 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,289
Number of extensions: 5773
Number of successful extensions: 5773
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5771
Number of HSP's successfully gapped: 2
Length of query: 1438
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1421
Effective length of database: 8,119,229
Effective search space: 11537424409
Effective search space used: 11537424409
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)