BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12509 (UTR included)
(1336 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1680_C1 1392 0.0
>BF14_1680_C1
Length = 833
Score = 1392 bits (702), Expect = 0.0
Identities = 731/739 (98%), Gaps = 5/739 (0%)
Strand = Plus / Plus
Query: 494 agtaaaaatgagtggcgctgtgagaaaactactagattctttgaagagcaaagaatttag 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 agtaaaaatgagtggcgctgtgagaaaactactagattctttgaagagcaaagaatttag 154
Query: 554 agattatttaatgagtactcatttctggggtccggtagccaattggggtattccactagc 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 agattatttaatgagtactcatttctggggtccggtagccaattggggtattccactagc 214
Query: 614 agccatcgcagatattaaaaaagaccccagttttatcagcggaaaaatgacttttgcgct 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 agccatcgcagatattaaaaaagaccccagttttatcagcggaaaaatgacttttgcgct 274
Query: 674 aacactgtactctctaatgttcatgcgtttcgcgtggaaggtgcagcccaggaatttgtt 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aacactgtactctctaatgttcatgcgtttcgcgtggaaggtgcagcccaggaatttgtt 334
Query: 734 gttgttcgcctgtcacttcaccaacgaatgcgcccaactgacccagggcgctagattcat 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gttgttcgcctgtcacttcaccaacgaatgcgcccaactgacccagggcgctagattcat 394
Query: 794 taattactattacatagaaaataagacgaagaatgaaaagtgattaaataatcaaatgaa 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 taattactattacatagaaaataagacgaagaatgaaaagtgattaaataatcaaatgaa 454
Query: 854 aacgtgacgatcatacctggtatggtcttgccaataacttagtggaatagacaatagttt 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aacgtgacgatcatacctggtatggtcttgccaataacttagtggaatagacaatagttt 514
Query: 914 tttttaa--atatatatataaagttataaatcagctgtcattctgccaaaatagtgacac 971
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tttttaaatatatatatataaagttataaatcagctgtcattctgccaaaatagtgacac 574
Query: 972 attgttagttgttacagtttttgcacaaattgaaattgttttatatattttgttttagtt 1031
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 575 attgttagttgttacagtttttgcacaaattgaaattattttatatattttgttttagtt 634
Query: 1032 aatgtaagatgaaaaaaaaaacgttgataagtgt---atagctcagttaccattttaata 1088
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 635 aatgtaagatgaaaaaaaaaacgttgataagtgtataatagctcagttaccattttaata 694
Query: 1089 tgatacatgttatccactttagataattgtataatataccaatctcttccgatgtatgta 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ccatacatgttatccactttagataattgtataatataccaatctcttccgatgtatgta 754
Query: 1149 gcgtgttgtgtagtggaaaataaaatacgagtaacgaatcgtacagtaactatatagaac 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gcgtgttgtgtagtggaaaataaaatacgagtaacgaatcgtacagtaactatatagaac 814
Query: 1209 ttatgatacgtttcgacgt 1227
|||||||||||||||||||
Sbjct: 815 ttatgatacgtttcgacgt 833
Score = 143 bits (72), Expect = 8e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 112 agcaaacagaaattatcaattaatatctaatagtctttattattttattaaaagacaaag 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 agcaaacagaaattatcaattaatatctaatagtctttattattttattaaaagacaaag 84
Query: 172 aacattaaaaag 183
||||||||||||
Sbjct: 85 aacattaaaaag 96
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,518
Number of extensions: 7755
Number of successful extensions: 7755
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7753
Number of HSP's successfully gapped: 2
Length of query: 1336
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1319
Effective length of database: 8,119,229
Effective search space: 10709263051
Effective search space used: 10709263051
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)