BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12516 (UTR included)
(3874 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_96_C1 1742 0.0
>BF14_96_C1
Length = 957
Score = 1742 bits (879), Expect = 0.0
Identities = 942/960 (98%), Gaps = 11/960 (1%)
Strand = Plus / Plus
Query: 2646 gtggccgtgtggaacgaggtggacggcaagacgaagctaataacggcagcaaacttttgt 2705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggccgtgtggaacgaggtggacggcaagacgaagctaataacggcagcaaacttttgt 60
Query: 2706 cagaacggcaaattcgccgtggtcgggacgtacgacggcaggtgcatcttctacacgacg 2765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagaacggcaaattcgccgtggtcgggacgtacgacggcaggtgcatcttctacacgacg 120
Query: 2766 gaccagctgaagtatcacacgcagatagacgtgcgctccacgcggggcaagaactccacg 2825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccagctgaagtatcacacgcagatagacgtgcgctccacgcggggcaagaactccacg 180
Query: 2826 ggacagaagatcagcggcatagaacccatgcccaacgacgacaagatactcgtcacctcc 2885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggacagaagatcagcggcatagaacccatgcccaacgacgacaagatactcgtcacctcc 240
Query: 2886 aacgacagccgcatcaggctctacgacctgcgggacctcaacctgtcctgcaagtacaag 2945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgacagccgcatcaggctctacgacctgcgggacctcaacctgtcctgcaagtacaag 300
Query: 2946 ggatacgtgaacgtgtccagtcagataaaagcgtctttctcccacgacgggaagtacata 3005
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 301 ggatacgtgaacgtgtccagtcagataaaggcgtccttctcccacgacgggaagtacata 360
Query: 3006 gtcagcggctccgagaaccagtgcatctacatctggaagacctgccacgactactccaag 3065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcagcggctccgagaaccagtgcatctacatctggaagacctgccacgactactccaag 420
Query: 3066 ttcacgtccgtgaggagggacaggaacgacttctgggagggcatcaaggcgcacaacgcg 3125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcacgtccgtgaggagggacaggaacgacttctgggagggcatcaaggcgcacaacgcg 480
Query: 3126 gtggtcacgtgcgctgtgttcgcgcccaaccccgaccacatgatacggaccatcacggag 3185
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtggtcacgtgcgccgtgttcgcgcccaaccccgaccacatgatacggaccatcacggag 540
Query: 3186 cgcgaggagcgcggcagggcagccagcggcgcggccggggacgccggggacgccaagggc 3245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgcgaggagcgcggcagggcagccagcggcgcggccggggacgccggggacgccaagggc 600
Query: 3246 gagggtctggtctcgtcgtcgcaggccggtcacgtgctggtgagcgccgacttcagcggg 3305
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagggtctggtgtcgtcgtcgcaggccggtcacgtgctggtgagcgccgacttcagcggg 660
Query: 3306 gtcattaaggtgttcgtgcaccgggcgagacccaaacacagctcgctgccggcctccgcg 3365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcattaaggtgttcgtgcaccgggcgagacccaaacacagctcgctgccggcctccgcg 720
Query: 3366 ctacagtaggaggcgggccacacacacacacatacaaggatcgtcaacacgcactcccac 3425
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 721 ctacagtaggaggcgggccacacacacacac--acaaggatcgtcaacacgcactcccac 778
Query: 3426 acgcatagtttaaacggcgagctatattaatcgcagataaagtatttcctcccttccctc 3485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 779 acgcatagtttaaacggcgagctatattaatcgcagataaagtatttcctcccttcaccc 838
Query: 3486 cccccgctcggccgtgtttttatttattctgtgcgtacattcacgctaagcttagtgtga 3545
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 839 cccccgctcggccgtg---ttatttattctgtgcgtacatt--cgctaagcttagtgtga 893
Query: 3546 gcaacactgtttccgggattctttgaaca----tgtcttataaattatcttcattgttaa 3601
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 894 gcaacactgtttccgggattctttgaacacatgtctcttataaattatcttcattgttaa 953
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,222
Number of extensions: 7018
Number of successful extensions: 7018
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7010
Number of HSP's successfully gapped: 1
Length of query: 3874
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3856
Effective length of database: 8,109,745
Effective search space: 31271176720
Effective search space used: 31271176720
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)