BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12520 (UTR included)
(1564 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A2H05 733 0.0
>BF01062A2H05
Length = 803
Score = 733 bits (370), Expect = 0.0
Identities = 391/398 (98%)
Strand = Plus / Plus
Query: 668 gaagacgccggccatgtgcgaacactgcggccggatattccagagtatggcgctgttgaa 727
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagacgccggtcatgtgcgaacactgcggccggatattccagagtatggcgctgttgaa 60
Query: 728 agatcacatgtgggtccacactggggagaaacggttcaagtgtgacaggtgtgacaagag 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatcacatgtgggtccacactggggagaaacggttcaagtgtgacaggtgtgacaagag 120
Query: 788 cttcacccagaagacaaacctggtcttccacatgagggtacactccgcaacaagacccac 847
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcacccagaagacaaacctggtgttccacatgagggtacactccgcaacaagacccac 180
Query: 848 gtacgagtgtccgttgtgtggcaaacacttcgccttcttcaataacaggagacggcatat 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtacgagtgtccgttgtgtggcaaacacttcgccttcttcaataacaggagacggcatat 240
Query: 908 gtttatccacacaggcctgaagcccttcaagtgtgacacctgcgggaagagcttcaccac 967
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttatccacacgggcctgaagccgttcaagtgtgacacctgcgggaagagcttcaccac 300
Query: 968 tgccggtgaacagcgagcccacacagaccatgtacatctcaagaaaccctggccgaagag 1027
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 301 ggccggtgaacagcgagcccacacagaccacgtgcatctcaagaaaccctggccgaagag 360
Query: 1028 ggcgaggagcggccagtggaagtgtgtagaggattaga 1065
||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcgaggagcggccagtggaagtgtgtagaggattaga 398
Score = 377 bits (190), Expect = e-104
Identities = 212/219 (96%), Gaps = 4/219 (1%)
Strand = Plus / Plus
Query: 1346 atcaatgagcgttgagtccttataagaagtttcaagatgaaattcaaattcaaataattt 1405
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atcaatgagtgtcgagtccttataagaagtttcaagatgaaattcaaattcaaataattt 458
Query: 1406 gtaccttggctgctagtgtcacattcaagccgacaactgccatgtcttaaggatatattg 1465
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 459 gtaccttggctgctagtgtcacattcaagccgacaactgccatgtcttaaggatatgttg 518
Query: 1466 tgtgaggaaatagagttatgtggttccttatataaagaattatatataaatatataataa 1525
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 519 tgtgaggaaatagagttatgtggttccttatataaagaattatat----atatataataa 574
Query: 1526 aaattataaaacaagaaataactagcaaatttttcatat 1564
|||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aaattataaaacaagaaataactagcaaatttttcatat 613
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,054
Number of extensions: 5303
Number of successful extensions: 5303
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5298
Number of HSP's successfully gapped: 2
Length of query: 1564
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1547
Effective length of database: 8,119,229
Effective search space: 12560447263
Effective search space used: 12560447263
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)