BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12547 (UTR included)
(1327 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1838_C1 1396 0.0
>BF14_1838_C1
Length = 817
Score = 1396 bits (704), Expect = 0.0
Identities = 720/724 (99%), Gaps = 1/724 (0%)
Strand = Plus / Plus
Query: 496 aaataatgggtgtccctgctggaaatgcggaaaacggcaaaaagatctttgttcaaagat 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 aaataatgggtgtccctgctggaaatgcggaaaacggcaaaaagatctttgttcaaagat 143
Query: 556 gtgctcaatgtcacaccgttgaggctggcggcaagcacaaagtaggacccaacctacatg 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gtgctcaatgtcacaccgttgaggctggcggcaagcacaaagtaggacccaacctacatg 203
Query: 616 gtttctttggtcgcaaaactggtcaagcttccgggtttaactattcagaagccaacaaag 675
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 204 gtttctttggtcgcaaaactggtcaagcttccggatttaactattcagaagccaacaaag 263
Query: 676 ctaaaggtatcacctggggcgatgacacactctttgagtacttggagaaccctaagaaat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctaaaggtatcacctggggcgatgacacactctttgagtacttggagaaccctaagaaat 323
Query: 736 acatccccggaacaaagatggtgtttgctggcctcaagaaagcaaatgaacgtgcggatc 795
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 324 acatccccggaacaaagatggtgttcgctggcctcaagaaagcaaatgaacgtgcggatc 383
Query: 796 taattgcctaccttaaagaagctactaagtaatttaaatgacattaggaaaacaaaaaca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taattgcctaccttaaagaagctactaagtaatttaaatgacattaggaaaacaaaaaca 443
Query: 856 ttaagaagagtaatccattatatggatggcacttcttatttactagcccaatcagtataa 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaagaagagtaatccattatatggatggcacttcttatttactagcccaatcagtataa 503
Query: 916 tcattatttaatgtatttatttagagttaacattttctattcatagaaagttactcttcc 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcattatttaatgtatttatttagagttaacattttctattcatagaaagttactcttcc 563
Query: 976 ttgcatcattttgtagttgcaaaagtgtggtttgtatgtacatgttataatgtatgacaa 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgcatcattttgtagttgcaaaagtgtggtttgtatgtacatgttataatgtatgacaa 623
Query: 1036 caattaattgctgaccataacaatgttgtgagtgaattttaatgttattaaattaataat 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caattaattgctgaccataacaatgttgtgagtgaattttaatgttattaaattaataat 683
Query: 1096 agacactatcattattttcattcgtaatactacccaaaaatatctatcctacttatcgaa 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agacactatcattattttcattcgtaatactacccaaaaatatctatcctacttatcgaa 743
Query: 1156 ctgtttgttaaagttacca-ttatttttttgtttaaatgtttaaataaattatgttttgt 1214
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctgtttgttaaagttaccatttttttttttgtttaaatgtttaaataaattatgttttgt 803
Query: 1215 ttta 1218
||||
Sbjct: 804 ttta 807
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,631
Number of extensions: 4849
Number of successful extensions: 4849
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4848
Number of HSP's successfully gapped: 1
Length of query: 1327
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1310
Effective length of database: 8,119,229
Effective search space: 10636189990
Effective search space used: 10636189990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)