BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN12607 (UTR included)
         (1963 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_335_C4                                                            82   4e-15
BF14_335_C5                                                            74   9e-13

>BF14_335_C4
          Length = 1491

 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 39   gtaggtttaaggggcccttatctaacgtgcattaaacgctcaccttatccatccaagctc 98
            |||||||||||||||| |||||| ||| ||||||||||||||||| | |  |||||||||
Sbjct: 1261 gtaggtttaaggggcctttatcttacgcgcattaaacgctcacctcaactttccaagctc 1202

                     
Query: 99   ctctctcta 107
            |||||||||
Sbjct: 1201 ctctctcta 1193


>BF14_335_C5
          Length = 1597

 Score = 73.8 bits (37), Expect = 9e-13
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                        
Query: 39   gtaggtttaaggggcccttatctaacgtgcattaaacgctcaccttatccatccaagctc 98
            |||||||||||| |||| | ||||||| |||||||||||||||||   || |||||||||
Sbjct: 1509 gtaggtttaaggcgcccctgtctaacgcgcattaaacgctcacctccaccgtccaagctc 1450

                     
Query: 99   ctctctcta 107
            |||||||||
Sbjct: 1449 ctctctcta 1441


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,783
Number of extensions: 5596
Number of successful extensions: 5596
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5596
Number of HSP's successfully gapped: 2
Length of query: 1963
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1946
Effective length of database: 8,119,229
Effective search space: 15800019634
Effective search space used: 15800019634
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)