BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12612 (UTR included)
(2368 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2261_C1 1396 0.0
>BF14_2261_C1
Length = 1071
Score = 1396 bits (704), Expect = 0.0
Identities = 732/740 (98%), Gaps = 1/740 (0%)
Strand = Plus / Plus
Query: 1 aactacagagatataatcacgacgatatagacggcaccttcacaatcaaaacagaaggat 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 305 aactacagagatataatcacgacgatatagatggcaccttcacaatcaaaacagaaggct 364
Query: 61 gcactatccccggtttgaagccttttgctgaagacatcaagaagttcatcgagcatccaa 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 365 gcactatccccggtttgaagccttttgctgaagatatcaagaagttcatcgagcatccaa 424
Query: 121 taattaaaccttgtcgcaactccaacataacacttcttgacaataataacacacatatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 taattaaaccttgtcgcaactccaacataacacttcttgacaataataacacacatatct 484
Query: 181 gggtaaaaactgagcatgtgcaattttatgaaatacctaaaaatcataacgtggtctgtt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 485 gggtaaaaactgagcatgtgcaattttatgaaatacctaaaaatcataacgtagtctgtt 544
Query: 241 gctacagatccttttaccgtccactggctattgctgatatatcttcatccgatatcgatg 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gctacagatccttctaccgtccactggctattgctgatatatcttcatccgatatcgatg 604
Query: 301 atagagttaattacgaagcctgtatagagtttacagactacatagaggtcatgaacgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atagagttaattacgaagcctgtatagagtttacagactacatagaggtcatgaacgaat 664
Query: 361 tcgtcagagtgtcttgtggctacaaagatgttttaatatacgagcaattttttatcttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tcgtcagagtgtcttgtggctacaaagatgttttaatatacgagcaattttttatcttca 724
Query: 421 cacctaaaaaacaacttttatctttaaaaggtgactatattgatgtga-ttcgaaatcag 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 725 cacctaaaaaacaacttttatctttaaaaggtgactatattgatgtgatttcgaaatcag 784
Query: 480 acagcctacaacgttattataatgggcattgatgcgctttcgagattgaattttcataga 539
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 785 acagcctacaacgttattataatgggcattgatgcgctttcaagattgaattttcataga 844
Query: 540 acaatgccgaaaactttggcatatttgaaaaagaagggtgctatagaattttatggttat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 acaatgccgaaaactttggcatatttgaaaaagaagggtgctatagaattttatggttat 904
Query: 600 aacaaagtcggtgacaatactttccctaacctgtcacctattcttctcggaatgaaagac 659
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 905 aacaaagtcggtgacaatactttccctaacctgtcgcctattcttctcggaatgaaagac 964
Query: 660 acagatttaaagaaggcttgctggccgcatgtaagagctacattcgataattgtcctttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 acagatttaaagaaggcttgctggccgcatgtaagagctacattcgataattgtcctttt 1024
Query: 720 atttgggatttatttaaaag 739
||||||||||||||||||||
Sbjct: 1025 atttgggatttatttaaaag 1044
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,215
Number of extensions: 3794
Number of successful extensions: 3794
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3793
Number of HSP's successfully gapped: 1
Length of query: 2368
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2351
Effective length of database: 8,119,229
Effective search space: 19088307379
Effective search space used: 19088307379
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)