BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12628 (UTR included)
(1696 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2287_C1 1364 0.0
>BF14_2287_C1
Length = 1128
Score = 1364 bits (688), Expect = 0.0
Identities = 701/704 (99%), Gaps = 1/704 (0%)
Strand = Plus / Plus
Query: 372 ctgacgtcttgtgatcacaagacttctcggttttgagctttctgtcaaagaagaaattgg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgacgtcttgtgatcacaagacttctcggttttgagctttctgtcaaagaagaaattgg 60
Query: 432 agaaaa-aaaggccgtcccttttgggatcttcaggtttatcaactccaattgacctcaaa 490
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaaaaaaggccgtcccttttgggatcttcaggtttatcaactccaattgacctcaaa 120
Query: 491 ctccatcaagatgagatactttatgacctacctgtttttgctgatcgtggggctggcggt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctccatcaagatgagatactttatgacctacctgtttttgctgatcgtggggctggcggt 180
Query: 551 acctatagtttcgatgtactatcttctgtctggaaagggtgagcaaataagtgtcggatg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acctatagtttcgatgtactatcttctgtctggaaagggtgagcaaataagtgtcggatg 240
Query: 611 gttcttggagaagacatccccatatatgtgggcatgcttaggaattgccatggccgtgtc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttcttggagaagacatccccatatatgtgggcatgcttaggaattgccatggccgtgtc 300
Query: 671 tttctctgtggtcggtgctgctatgggcattcacacgacgggagtgagcatagtcggagg 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 tttctctgtggtcggtgctgctatgggcattcacacgacgggagtgagcatagtaggagg 360
Query: 731 aggtgtcaaggcccctaggattaaaactaagaacttgatctccgtcattttctgtgaagc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggtgtcaaggcccctaggattaaaactaagaacttgatctccgtcattttctgtgaagc 420
Query: 791 cgtagctatttacggtttgatcacagcaatcgtcctttctggtatcttggagcagtacaa 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtagctatttacggtttgatcacagcaatcgtcctttctggtatcttggagcagtacaa 480
Query: 851 ggaaccagtcatcgacaaaaatatcgaagaagcgaattggatggctggttacgtgatgtt 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaaccagtcatcgacaaaaatatcgaagaagcgaattggatggctggttacgtgatgtt 540
Query: 911 cggagctggtttagctgtgggcttggtaaacttgttctgtggtatcgctgtcggaatcgt 970
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggagctgggttagctgtgggcttggtaaacttgttctgtggtatcgctgtcggaatcgt 600
Query: 971 gggttccggcgcggccttggctgatgctgctaatgctgccctttttgtcaagatcctcat 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gggttccggcgcggccttggctgatgctgctaatgctgccctttttgtcaagatcctcat 660
Query: 1031 cgtagaaatcttcggatcagccattgggttgtttggactcattg 1074
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgtagaaatcttcggatcagccattgggttgtttggactcattg 704
Score = 720 bits (363), Expect = 0.0
Identities = 373/375 (99%), Gaps = 1/375 (0%)
Strand = Plus / Plus
Query: 1074 gagaaagtacaacttgaaattaagtttaacaagcattttccagttgcccgtgctaaaata 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gagaaagtacaacttgaaattaagtttaacaagcattttccagttgcccgtgctaaaata 814
Query: 1134 accgagaagcaactttgtttcaataagtgttggaattatcttcagccactgtttgttgtg 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 accgagaagcaactttgtttcaataagtgttggaattatcttcagccactgtttgttgtg 874
Query: 1194 taatgaataagttttccatatttaatatttgatcttagcaccccaaagagctcaaatgtt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 taatgaataagttttccatatttaatatttgatcttagcaccccaaagagctcaaatgtt 934
Query: 1254 gttttagcatattattttttttgttttatcattctgttaaaatgtcatgaacattttttt 1313
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 935 gttttagcatatttttttttttgttttatcattctgttaaaatgtcatgaaca-tttttt 993
Query: 1314 ttcttacactaatttctcttgtcaaactctttctaaacttgtgctaagatcttctattat 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 ttcttacactaatttctcttgtcaaactctttctaaacttgtgctaagatcttctattat 1053
Query: 1374 gctgatttttaatttggagtgttgtagacaaaatgtaactcatagtaatgtgtttattat 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 gctgatttttaatttggagtgttgtagacaaaatgtaactcatagtaatgtgtttattat 1113
Query: 1434 accctcgcagcatcc 1448
|||||||||||||||
Sbjct: 1114 accctcgcagcatcc 1128
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,957
Number of extensions: 19912
Number of successful extensions: 19912
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19910
Number of HSP's successfully gapped: 2
Length of query: 1696
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1679
Effective length of database: 8,119,229
Effective search space: 13632185491
Effective search space used: 13632185491
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)