BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12637 (UTR included)
(1561 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_548_C1 961 0.0
>BF14_548_C1
Length = 1701
Score = 961 bits (485), Expect = 0.0
Identities = 677/741 (91%)
Strand = Plus / Plus
Query: 293 ggcagattggatcgtcaataactttggtcccacaatccggaactcctcttttaaagatgt 352
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 866 ggcagattggatcgtcaataactttggtccaacaatccggaactcctcttttaaagatgt 925
Query: 353 taagataatggttggagacgatcagcgactcaccataccttattggtttaacgagatggt 412
||| ||||||||||||||||||||||| ||||||| ||||||||||||| || ||||||
Sbjct: 926 taaaataatggttggagacgatcagcggttcaccattccttattggtttatcgggatggt 985
Query: 413 ttcgtatcgtcccgaatctctaaaatacgtggacggtgtcgctgtacactactatacaga 472
| |||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 986 ggcatatcgtcctgaatctctgaagtacgtggacggtgtcgctgtacactactatacaga 1045
Query: 473 catgtttgtctccccggttaagcttgaagcagttactaagacccatccagaaaaatttat 532
| |||| | |||||| || | ||||||| || |||||| | |||||||| |||||| |
Sbjct: 1046 ccagtttatttccccgattgcgtttgaagccgtgactaaggctcatccagagaaatttgt 1105
Query: 533 tctggccactgaagcctgtgaaggcgttaatgccggacagaaaaactttgtgctgttggg 592
||| |||||||||||||||||||| | || | |||||||| || |||||||
Sbjct: 1106 tctttccactgaagcctgtgaaggcactttaccctggcagaaaaataaggtcttgttggg 1165
Query: 593 ctcctgggaaagagcgaggtcatacatattagacatactggaagatttaaattataactt 652
|| ||| || | |||| | |||| | ||||| ||| |||| ||||| |||||||||||
Sbjct: 1166 atcatggcaacgtgcgaagacatatgttttagatatattggaggatttgaattataactt 1225
Query: 653 agttggatggattgattggaatctgtgtctcgaccctcgcggaggtcccaactgggcgag 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 agttggatggattgattggaatctgtgtctcgaccctcgcggaggtcccaactgggcgag 1285
Query: 713 taacttcgctgatgctgctataattgttgacaaaacaaacgacgaattcataaaacagcc 772
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1286 taacttcgctgatgctgctataattgttgacaaaacaaacgacgagttcataaaacagcc 1345
Query: 773 catgttctatgcgatgggacatttttcaaagtttattcctcgtggttccagaagaataaa 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1346 catgttctatgcgatgggacatttttcaaagtttattcctcgtggttccagaagattaaa 1405
Query: 833 agtcaaagaacataagtcaatatttgaactttctttgagacacgtcgcctttatcacgcc 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 agtcaaagaacataagtcaatatttgaactttctttgagacacgtcgcctttatcacgcc 1465
Query: 893 gagaggtacgatcgtggccgtcatttacaacgacggccgttcgcagacgatatccataac 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 gagaggtacgatcgtggccgtcatttacaacgacggccgttcgcagacgatatccataac 1525
Query: 953 tattaaaaacagacagttgaaggtaaagctcgaaggggattcagtgtcgacgatagagtt 1012
|||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||
Sbjct: 1526 tattaaaaacagacagttgaagttaaagctcgaaggggattcagtgactacgatagaatt 1585
Query: 1013 ccaatctgatgaagtcatgac 1033
|||| ||||||||||||||||
Sbjct: 1586 ccaaactgatgaagtcatgac 1606
Score = 168 bits (85), Expect = 2e-41
Identities = 115/125 (92%)
Strand = Plus / Plus
Query: 101 atttcttcaaaagtacaatgaatctgggataccgatctggggtctcacaaccaccaacga 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atttcttcaaaagtacaatgaatctgggataccgatctggggtctcacaaccaccaacga 802
Query: 161 acccatcaatggagtattcaatctcaccacctttaactctctcggctggacagtcactga 220
|||||||||||||||||| || | || ||| ||||||||||||||||| |||||| |
Sbjct: 803 acccatcaatggagtatttgatttatgcaacttcaactctctcggctggaccgtcactaa 862
Query: 221 aatgg 225
|||||
Sbjct: 863 aatgg 867
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,902
Number of extensions: 5857
Number of successful extensions: 5857
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5857
Number of HSP's successfully gapped: 3
Length of query: 1561
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1544
Effective length of database: 8,119,229
Effective search space: 12536089576
Effective search space used: 12536089576
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)