BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12643 (UTR included)
(1849 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A1A06 1249 0.0
>BF01020A1A06
Length = 674
Score = 1249 bits (630), Expect = 0.0
Identities = 654/663 (98%)
Strand = Plus / Plus
Query: 156 aaagtagagaagactggccattccggaacacttgatcctaaggttactggttgccttatc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aaagtagagaagactggccattccggaacacttgatcctaaggttactggttgccttatc 71
Query: 216 gtgtgtatagacagagcaacgaggctggtgaaatcccagcagaatgctggtaaggaatat 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gtgtgtatagacagagcaacgaggctggtgaaatcccagcagaatgctggtaaggaatat 131
Query: 276 gtcgctgtattcaacctgcactcgcccgtagaaaaccttaagaaagtaacacagggtttg 335
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 132 gtcgctgtattcaacctgcactcacccgtagaaaaccttaagaaagtaacacagggtttg 191
Query: 336 gagaaattacgaggtgctcttttccaacgtccgccattgatatcagcagtcaaacgacag 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gagaaattacgaggtgctcttttccaacgtccgccattgatatcagcagtcaaacgacag 251
Query: 396 ctccgagtgcgttctgtgtacgacagcaagttactcgattatgaccaggaacgtaatatt 455
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctccgagtgcgttccgtgtacgacagcaagttactcgattatgaccaggaacgtaatatt 311
Query: 456 ggtgttttctgggttagttgcgaggctggttcctatatacgtacgatgtgcgtacatttg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggtgttttctgggttagttgcgaggctggttcctatatacgtacgatgtgcgtacatttg 371
Query: 516 ggtctcatgctcggagttggaggacaaatgattgaattacgcagagtccgctctggtata 575
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 372 ggtctcatgctcggagttggaggacaaatgattgaactacgcagagtccgctctggtata 431
Query: 576 cagggggagaaggagggcatggttaccatgcacgacatattggacgctcaatgggcgtat 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cagggggagaaggagggcatggttaccatgcacgacatattggacgctcaatgggcgtat 491
Query: 636 gagaaccataaggatgaaacctatttgagaagagtcattaagccattagaaggtctgctg 695
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 492 gagaaccataaggatgaaacctatttaagaagagtcatcaagccattagaaggtctgctg 551
Query: 696 gtagctcacaagaggatctttatcaaggacagtgcggttaacgcagtatgttacggagcc 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtagctcacaagaggatctttatcaaggacagtgcggttaacgcagtatgttacggagcc 611
Query: 756 aaagtacttttgcctggtatcctaagatacgaggatggtattgaagtcgaccaagaaatt 815
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 612 aaagtacttttgcctggtatcctaagatacgnnnacggtattgaagtcgaccaagaaatt 671
Query: 816 gtt 818
|||
Sbjct: 672 gtt 674
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 210,966
Number of extensions: 3943
Number of successful extensions: 3943
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3943
Number of HSP's successfully gapped: 1
Length of query: 1849
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1832
Effective length of database: 8,119,229
Effective search space: 14874427528
Effective search space used: 14874427528
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)