BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12645 (UTR included)
(1453 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A2C11 1324 0.0
>BF01029A2C11
Length = 760
Score = 1324 bits (668), Expect = 0.0
Identities = 743/769 (96%), Gaps = 10/769 (1%)
Strand = Plus / Plus
Query: 405 gtgtttaatatcagcgtgggttagagcgtgtattatttattttttttaagtaaaaaataa 464
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 1 gtgtttaatatcagcgtgggttagagcgtgttttatttatttttttaaagtaaaaaataa 60
Query: 465 ttattaagttatcttattataaaacaaaccaccgaaatggcgggagtgttgttcgaagat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttattaagttatcttattataaaacaaaccaccgaaatggcgggagtgttgttcgaagat 120
Query: 525 atattcaacgtcaaagacatggaccagggcggtaagaaattcgatcgtgtgagcagattg 584
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 atattcaacgtcaaagacatggaccagggcggtaagaaattcgatcgtgtgagccgattg 180
Query: 585 cattgtgaatcagaatcgtttaaaatggatctcattttggatataaattcttggatatat 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattgtgaatcagaatcgtttaaaatggatctcattttggatataaattcttggatatat 240
Query: 645 cctatggagctgggagataagttcagattggttttggccacaacattacgagaaaacgga 704
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 cctatggagcttggagataagttcagattggttttggcaacaacattacgagaaaacgga 300
Query: 705 tatccggatggcggtgaatggaatcctctcgaaacagagggaaatagagctgatagcttt 764
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 tatccggatggcggtgaatggaatcctctcgaaacagagggaaatagggctgatagcttt 360
Query: 765 gaatatgttatgtacggaaaagtttatagactagatggtgatgaattggccatggaaccg 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaatatgttatgtacggaaaagtttatagactagatggtgatgaattggccatggaaccg 420
Query: 825 acatcccgactgtcagcttttgtttcattcggtggactcctcatgcggttgcagggtgac 884
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 421 acatcccgactgtcagcttttgtttcatttggtggactcctcatgcggttgcagggtgac 480
Query: 885 gccaacaacctgcacggcttcgaagtcgaccagcacatgtacttgttaatgaagaaacta 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccaacaacctgcacggcttcgaagtcgaccagcacatgtacttgttaatgaagaaacta 540
Query: 945 gctttttaagaataataaatgcgataataattttattgttgaataatgtaaaaaatatcc 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctttttaagaataataaatgcgataataattttattgttgaataatgtaaaaaatatcc 600
Query: 1005 tctatagactaactagcatctccttgtatggtcatatgaccgtgcaaatgtacgccatgg 1064
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtatagactaagtagcatctccttgtatggtcatatgaccgtgcaaatgtacgccatgg 660
Query: 1065 gtttataaaaaaaaaaa-tttcacaaaaagtcactgtatttacctcatttgcatgttttg 1123
||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||
Sbjct: 661 gtttataaaaaaaaaaatttttacaaaaactcactgt---------atttgcatgttttg 711
Query: 1124 aagagatattttttttattacaaaattcatgtaatagaaacatttttgt 1172
| | ||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 712 angnnatattttttttattacaaaattcatataataggaacatttttgt 760
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 366,619
Number of extensions: 14219
Number of successful extensions: 14219
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14218
Number of HSP's successfully gapped: 2
Length of query: 1453
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1436
Effective length of database: 8,119,229
Effective search space: 11659212844
Effective search space used: 11659212844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)