BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12652 (UTR included)
(1639 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A1E08 1207 0.0
>BF01053A1E08
Length = 649
Score = 1207 bits (609), Expect = 0.0
Identities = 618/621 (99%)
Strand = Plus / Plus
Query: 544 ttggggcggaattcacattacctggtgaatgtccaaccgttaagatacaggagaacctgg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggggcggaattcacattacctggtgaatgtccaaccgttaagatacaggagaacctgg 60
Query: 604 attatacaaagttttcaggcgtttggtataacgtagccagctatgcgagtgatggtcgga 663
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attatacgaagttttcaggcgtttggtataacgtagccagctatgcgagtgatggtcgga 120
Query: 664 gcatatacgactgcgcttctctcagcttccaggaggataaccttggctatactctcaggg 723
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 gcatatacgactgcgcttctctcagcttccaggaggataaccttggctatactctcagag 180
Query: 724 agacatacgttgatattgaccagggcaaccgtacacagaagtcgtattttgctagagtag 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agacatacgttgatattgaccagggcaaccgtacacagaagtcgtattttgctagagtag 240
Query: 784 acccaacttttgatgctggtacaaaagcacaattcatcgtcagtcatgaagatggagata 843
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atccaacttttgatgctggtacaaaagcacaattcatcgtcagtcatgaagatggagata 300
Query: 844 aggtgctgcagttccctttttttatattatcaacggactacagtggatatgcaatcgcct 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggtgctgcagttccctttttttatattatcaacggactacagtggatatgcaatcgcct 360
Query: 904 atacttgtaaaaccctaaagaaaaagcaaaggacccattacgtattcacttgggttttat 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atacttgtaaaaccctaaagaaaaagcaaaggacccattacgtattcacttgggttttat 420
Query: 964 ctcgcaaaaaggaaaagttacaagatgaaacgctgaaaaatgttgagaacgttctggcta 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcgcaaaaaggaaaagttacaagatgaaacgctgaaaaatgttgagaacgttctggcta 480
Query: 1024 aatacagtgagttagctgaacaccgccagtcatttgttcttaaggacttctcagaaagct 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatacagtgagttagctgaacaccgccagtcatttgttcttaaggacttctcagaaagct 540
Query: 1084 catgtgcatattctaataaatacgaaaccgatttctttacaagcaacttctggtaaccaa 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catgtgcatattctaataaatacgaaaccgatttctttacaagcaacttctggtaaccaa 600
Query: 1144 attgttaaaaatatattatta 1164
|||||||||||||||||||||
Sbjct: 601 attgttaaaaatatattatta 621
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,002
Number of extensions: 5803
Number of successful extensions: 5803
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5803
Number of HSP's successfully gapped: 1
Length of query: 1639
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1622
Effective length of database: 8,119,229
Effective search space: 13169389438
Effective search space used: 13169389438
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)