BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12658 (UTR included)
(3262 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2C10 1281 0.0
>BF01053B2C10
Length = 845
Score = 1281 bits (646), Expect = 0.0
Identities = 680/691 (98%), Gaps = 1/691 (0%)
Strand = Plus / Plus
Query: 496 taaaaatgtcgcgggacagatcatcacgtcgattttaccgcgctgagtcgacccatgacc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 taaaaatgtcgcgggacagatcatcacgtcgattttaccgcgctgagtcgacccatgacc 215
Query: 556 ttttgtcgtacatggacaagggtcaggctgcttgcgaggagaatagatggacattcgaga 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 216 ttttgtcgtacatggacaagggtcaggctgcttgcgaggagaatagatggacatt-gaga 274
Query: 616 cagcctgggaggctgccaataaagttggtggcatctacactgtcataagatcaaaggcgt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cagcctgggaggctgccaataaagttggtggcatctacactgtcataagatcaaaggcgt 334
Query: 676 atgtatcaactgaggaaatgggagataactactgtttattaggtccttataaggagacca 735
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atgtatcaaccgaggaaatgggagataactactgtttattaggtccttataaggagacca 394
Query: 736 gtgccagaaccgaagtggaggaatcagactttccccccaactctcctcttactgtagcag 795
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtgccagaactgaagtggaggaatcagactttccccccaactctcctcttactgtagcag 454
Query: 796 tgaatgccatgagaagtcaaggatataagcttcacacaggaacttggctggtggacggaa 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 455 tgaatgccatgagaagtcaaggatataagcttcacacaggaacttggctggtggatggaa 514
Query: 856 accctcagatcatcctcttcgacatcggttcagctgcgtggcagatggattccttcaagc 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 accctcagatcatcctcttcgacatcggttcagctgcgtggcagatggattccttcaagc 574
Query: 916 aggagctatgggatacgacatctgtcgggataccgcacctagacgtggaggccaacgacg 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aggagctatgggatacgacatctgtcgggataccgcacctagacgtggaggccaacgacg 634
Query: 976 ccgttattttgggcttcatggtggctcaatttatcacagagttcagaaaagcagccgaga 1035
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 635 ccgttattttggggttcatggtggctcaatttataacagagttcagaaaagcagccgaga 694
Query: 1036 actacagcgacactccgccgcgagtggtcgcacatttccacgagtggcaggctggtatag 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 actacagcgacactccgccgcgagtggtcgcacatttccacgagtggcaggctggtatag 754
Query: 1096 gacttatagttttgagaatccgtcacgtcgatgtggcgacagtgttcacaacacacgcga 1155
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gtcttatagtnnngagaatccgtcacgtcgatgtggcgacagtgttcacaacacacgcga 814
Query: 1156 ccctcctcggccgatacctgtgtgctggcag 1186
| |||||||||||||||||||||||||||||
Sbjct: 815 ctctcctcggccgatacctgtgtgctggcag 845
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,456
Number of extensions: 6120
Number of successful extensions: 6120
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6119
Number of HSP's successfully gapped: 1
Length of query: 3262
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3244
Effective length of database: 8,109,745
Effective search space: 26308012780
Effective search space used: 26308012780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)