BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12663 (UTR included)
(4312 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A1B11 1570 0.0
BF14_365_C1 92 9e-18
BF14_365_C2 84 2e-15
>BF01045A1B11
Length = 842
Score = 1570 bits (792), Expect = 0.0
Identities = 823/832 (98%), Gaps = 1/832 (0%)
Strand = Plus / Plus
Query: 3080 gcgcgatgactgcacgacgcggcggttggcgcgacaaaaggtcacaaaacaaataagttt 3139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gcgcgatgactgcacgacgcggcggttggcgcgacaaaaggtcacaaaacaaataagttt 70
Query: 3140 attggtaaacgacaagaaccatcagccggtgcagctggaagatcccaagctgtccgacga 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 attggtaaacgacaagaaccatcagccggtgcagctggaagatcccaagctgtccgacga 130
Query: 3200 caacaccgaggagagggtcatatacgtggcctacgacaccgaagactccgagtccaccgc 3259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 caacaccgaggagagggtcatatacgtggcctacgacaccgaagactccgagtccaccgc 190
Query: 3260 cttccatatattagacccagaacaggtgcagactgctgatatagaacagaacaaagtact 3319
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cttccatatattagacccggaacaggtgcagactgctgatatagaacagaacaaagtact 250
Query: 3320 gacgacctgcgagctttatacacgaccgtcgctgctggtgtcgcaacaactacagcagtt 3379
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gacaacctgcgagctttatacacgaccgtcgctgctggtgtcgcaacaactacagcagtt 310
Query: 3380 acagctggagacggcggaacagcaggtggtggaacacgagcagctggaaatagacgaaca 3439
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 311 acagctggagacggccgaacagcaggtggtggaacacgagcagctggaaatagacaaaca 370
Query: 3440 cctggagctggaacacgaggaactcggcctggacgacgagcaaattaagatcgagaacca 3499
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 371 cctggagctggaacacgaggaactcggcctggacgacgagcaaattaagatcgaaaacca 430
Query: 3500 gatggagattgaagaaattgaggaaatagaaacgagtcctgtagtggtcggcgggcagag 3559
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 431 gatggagattgaagaaattgaggaaatagaaacgagtcctgtagtggtcggcggacagag 490
Query: 3560 catacccgtgacggacgagcgcggtaacccactacacttcaccatggctgacggaaccaa 3619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 catacccgtgacggacgagcgcggtaacccactacacttcaccatggctgacggaaccaa 550
Query: 3620 gctggctatcacctccgtggacggcaagtcgctgcaggtgataacacaagacggccagac 3679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gctggctatcacctccgtggacggcaagtcgctgcaggtgataacacaagacggccagac 610
Query: 3680 gataccggtggagatcaacggatacgacaaccaagaccaggtgccgccgagccccaacgc 3739
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gataccagtggagatcaacggatacgacaaccaagaccaggtgccgccgagccccaacgc 670
Query: 3740 ggtggttcaccagctccacctgcagaagactccgccgcccgctcccgtcactcactactt 3799
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agtggttcaccagctccacctgcagaagactccgccgcccgctcccgtcactcactactt 730
Query: 3800 cactatcgtctgacacgggttgacattcctctgtctctcatcacc-gtctccaggctacc 3858
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 731 cactatcgtctgacacgggttgacattcctctgtctctcatcaccagtctccaggctacc 790
Query: 3859 cgtaccgtgatgcgccctaccacaagtgcggcccgtcactacatacggaccg 3910
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cgtaccgtgatgcgccctaccacaagtgcggcccgtcactacatacggaccg 842
>BF14_365_C1
Length = 770
Score = 91.7 bits (46), Expect = 9e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 1 gcgattaaaaataataaaaaccgaaactacggctcccagccccagg 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gcgattaaaaataataaaaaccgaaactacggctcccagccccagg 13
>BF14_365_C2
Length = 867
Score = 83.8 bits (42), Expect = 2e-15
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 1 gcgattaaaaataataaaaaccgaaactacggctcccagccc 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 gcgattaaaaataataaaaaccgaaactacggctcccagccc 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 411,720
Number of extensions: 7956
Number of successful extensions: 7956
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7955
Number of HSP's successfully gapped: 3
Length of query: 4312
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4294
Effective length of database: 8,109,745
Effective search space: 34823245030
Effective search space used: 34823245030
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)