BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12673 (UTR included)
(5371 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1E12 1191 0.0
BF14_42_C1 143 3e-33
BF14_2805_C1 78 2e-13
BF01045B2F10 70 4e-11
>BF01022A1E12
Length = 657
Score = 1191 bits (601), Expect = 0.0
Identities = 616/621 (99%)
Strand = Plus / Plus
Query: 2649 caggagatggtggtggacgcccccaaccaaactgtggacaatgtagcgttggaacaatac 2708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 caggagatggtggtggacgcccccaaccaaactgtggacaatgtagcgttggaacaatac 96
Query: 2709 caacaatcgatagcgaaaatgaactccagcctgcaggatatacagagcgacattgcgcgc 2768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 caacaatcgatagcgaaaatgaactccagcctgcaggatatacagagcgacattgcgcgc 156
Query: 2769 ctcgccagccagcaaacacagctacaacagcagcagcagcagcaagcccagcagcagcaa 2828
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctcgccagccagcaaacacagctacaacagcagcagcagcagcaagcccagcagcagcag 216
Query: 2829 caacaacaccagcagcagcagcagcaacagcagcaacaacaattgcaacagcaactacag 2888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 caacaacaccagcagcagcagcagcaacagcagcaacaacaattgcaacagcaactacag 276
Query: 2889 cagcaacaacagcaattacaacaacagcagcaacagctgttacagcaacagcaacaagcc 2948
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 277 cagcaacaacagcaattacaacaacaacagcaacagctgttacagcaacagcaacaagcc 336
Query: 2949 aagcaactatttcaacagcaccaaccgccgccgtccccattccaacaacatattcagcaa 3008
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 337 aagcaactatttcaacagcaccaaccgccgccgtccccattccaacagcatattcagcaa 396
Query: 3009 aacattccacaactgcacagccaattcagctcacagcacaatgtgtcgcggacgatcaac 3068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aacattccacaactgcacagccaattcagctcacagcacaatgtgtcgcggacgatcaac 456
Query: 3069 agcttcggctccaccccgcacataccgagggacttctaccagtccaaccagatgaccaac 3128
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 457 agcttcggctccaccccgcacataccgagggacttctaccaatccaaccagatgaccaac 516
Query: 3129 cagatgggaacccagttggccaacatgttgaacaaccagctgggcaaccagtcgccgcag 3188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cagatgggaacccagttggccaacatgttgaacaaccagctgggcaaccagtcgccgcag 576
Query: 3189 acctttcagtatcagtttagggatatagaccaagaattcggaagacaacagttctatttg 3248
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 577 acctttcagtatcagtttagggatatagaccaagaattcggaagacagcagttctatttg 636
Query: 3249 cacgatagtccgccgccgcct 3269
|||||||||||||||||||||
Sbjct: 637 cacgatagtccgccgccgcct 657
>BF14_42_C1
Length = 1382
Score = 143 bits (72), Expect = 3e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 5300 gaccgcggtgccatgtcccccggcagcgcctccagcggtcccctcggtcgccgcggctct 5359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 gaccgcggtgccatgtcccccggcagcgcctccagcggtcccctcggtcgccgcggctct 86
Query: 5360 tgcaagacatca 5371
||||||||||||
Sbjct: 87 tgcaagacatca 98
>BF14_2805_C1
Length = 816
Score = 77.8 bits (39), Expect = 2e-13
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 2817 cagcagcagcaacaacaacaccagcagcagcagcagcaacagcagcaacaacaattgcaa 2876
||||||||||| |||||||| || ||||||||||| ||||| |||||||| ||| ||||
Sbjct: 379 cagcagcagcagcaacaacaacatcagcagcagcatcaacaacagcaacaccaacagcaa 438
Query: 2877 cagcaactacagcagcaacaacagcaa 2903
|| || | |||||| ||||||||||||
Sbjct: 439 catcatcaacagcaacaacaacagcaa 465
>BF01045B2F10
Length = 783
Score = 69.9 bits (35), Expect = 4e-11
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 2817 cagcagcagcaacaacaacaccagcagcagcagcagcaacagcagcaacaacaattgcaa 2876
||||||||||| |||||||| || |||||||| || ||||| |||||||| ||| ||||
Sbjct: 619 cagcagcagcagcaacaacaacatcagcagcaacatcaacaacagcaacaccaacagcaa 678
Query: 2877 cagcaactacagcagcaacaacagcaa 2903
|| || | |||||| ||||||||||||
Sbjct: 679 catcatcaacagcaacaacaacagcaa 705
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 445,695
Number of extensions: 9270
Number of successful extensions: 9270
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 9212
Number of HSP's successfully gapped: 4
Length of query: 5371
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5353
Effective length of database: 8,109,745
Effective search space: 43411464985
Effective search space used: 43411464985
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)