BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12674 (UTR included)
(1786 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_42_C1 2502 0.0
>BF14_42_C1
Length = 1382
Score = 2502 bits (1262), Expect = 0.0
Identities = 1295/1305 (99%), Gaps = 7/1305 (0%)
Strand = Plus / Plus
Query: 489 gaccgcggtgccatgtcccccggcagcgcctccagcggtcccctcggtcgccgcggctct 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 gaccgcggtgccatgtcccccggcagcgcctccagcggtcccctcggtcgccgcggctct 86
Query: 549 tgcaagacatcacgagagcgtgtgaatgatgaaccacagtcgactcgtggaaggtctaaa 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tgcaagacatcacgagagcgtgtgaatgatgaaccacagtcgactcgtggaaggtctaaa 146
Query: 609 tattccacttaccagaataactttaaggcggggaggaaatctagctctcttatgaacttg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tattccacttaccagaataactttaaggcggggaggaaatctagctctcttatgaacttg 206
Query: 669 tgcgactcgggtctcggtcgtgctacgccccctcgtcgcgcggcgtcccccggcgggcga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tgcgactcgggtctcggtcgtgctacgccccctcgtcgcgcggcgtcccccggcgggcga 266
Query: 729 gcgctcggctctccggcctcggggcccggttccctgcctggagcccttccgggagccatc 788
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 267 gcgctcggctctccggcctcggggcccgggtccctgcctggagcccttccgggagccatc 326
Query: 789 gggaagaggaggcaccacgacgacggatcagacgtgtcctccacacactcctccatcatg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gggaagaggaggcaccacgacgacggatcagacgtgtcctccacacactcctccatcatg 386
Query: 849 gactactccggtcctcgtctgtacaaacagccggcgacgaagtccaaccgcggtataatg 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gactactccggtcctcgtctgtacaaacagccggcgacgaagtccaaccgcggtataatg 446
Query: 909 ttgaacgcggttgagtactgcgtgttcccgggggccgtgaacgccgaggccaagcggcgt 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttgaacgcggttgagtactgcgtgttcccgggggccgtgaacgccgaggccaagcggcgt 506
Query: 969 gtgctggaggagatcgctcgcagtgagagcaaacacttcctggtgctgttccgggacgct 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtgctggaggagatcgctcgcagtgagagcaaacacttcctggtgctgttccgggacgct 566
Query: 1029 ggctgccagttcagggcgctctacagctactgccccgacaccgacaccgtcgccaagttg 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggctgccagttcagggcgctctacagctactgccccgacaccgacaccgtcgccaagttg 626
Query: 1089 tacggcacgggacccaaacacgtcaacgatagaatgttcgacaagttcttcaaatataat 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 627 tacggcacgggacccaaacacgtcaacgatagaatgttcgacaagttcttcaagtataat 686
Query: 1149 tcgggcagtaaatgcttctctcaagttcacacgaagcacctgaccgtcaccatagatgcc 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcgggcagtaaatgcttctctcaagttcacacgaagcacctgaccgtcaccatagatgcc 746
Query: 1209 ttcacgatacacaactccctgtggcagggaaagaaggtccagttgccgagcaagaaggac 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttcacgatacacaactccctgtggcagggaaagaaggtccagttgccgagcaagaaggac 806
Query: 1269 atggcgctcgtcatctagggctgcgtctcatcgttaacaatacacgttatctagtcgccg 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 atggcgctcgtcatctagggctgcgtctcatcgttaacaatacacgttatctagtcgccg 866
Query: 1329 gctgtagtcgagtcaagccttacagactcccggcttaaaacgcctcgctggaacgtcgag 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gctgtagtcgagtcaagccttacagactcccggcttaaaacgcctcgctggaacgtcgag 926
Query: 1389 acgctgtattgaactcagcgagtttctcgtgccgggaatcgttttaataatttctgtttt 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 acgctgtattgaactcagcgagtttctcgtgccgggaatcgttttaataatttctgtttt 986
Query: 1449 ttttt-----tatatatcgtggttgtaagctgcatttacttagtcttaatgcacacagat 1503
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 tttttttttatatatatcgtggttgtaagctgcatttacttagtcttaatgcacacagat 1046
Query: 1504 taaaaatgtcgaagccggttttaatctatgacagtaagacggtcctgtgaatgcagtcgt 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 taaaaatgtcgaagccggttttaatctatgacagtaagacggtcctgtgaatgcagtcgt 1106
Query: 1564 cgttcagaaacgtcgcactgaatgttgatagtttgttacttgcgacgattttgcaacgat 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 cgttcagaaacgtcgcactgaatgttgatagtttgttacttgcgacgattttgcaacgat 1166
Query: 1624 ccgatggtcgaggtctgtgtgacggagaggaggggcggaaactcgaatccgataggtgat 1683
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1167 ccgatggtcgaggtctgtgtgacggagagtaggggcggaaactcgaatccgataggtgat 1226
Query: 1684 ggcgcgcctcgacctgactggaatgttctag--atatatatatattttggctttaaggcg 1741
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1227 ggcgcgcctcgacctgactggaatgttctagatatatatatatattttggctttaaggcg 1286
Query: 1742 tcctttatcgattttaacgtgttttagcgtaatcattgcttaagt 1786
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 tcctttatcgattttaacgtgttttagcgtaatcattgcttaagt 1331
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 205,003
Number of extensions: 9022
Number of successful extensions: 9022
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9019
Number of HSP's successfully gapped: 1
Length of query: 1786
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1769
Effective length of database: 8,119,229
Effective search space: 14362916101
Effective search space used: 14362916101
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)