BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12675 (UTR included)
(1519 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_365_C1 1495 0.0
BF14_365_C2 674 0.0
BF01052B1A07 196 7e-50
>BF14_365_C1
Length = 770
Score = 1495 bits (754), Expect = 0.0
Identities = 757/758 (99%)
Strand = Plus / Plus
Query: 440 cctggggctgggagccgtagtttcggtttttattatttttaatcgcccgtaatcctacaa 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 cctggggctgggagccgtagtttcggtttttattatttttaatcgcccgtaatcctacaa 72
Query: 500 aatgaggatctataaggatattattactggtgacgagatgttctcggacacatacagaat 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aatgaggatctataaggatattattactggtgacgagatgttctcggacacatacagaat 132
Query: 560 caagctggttgatgaagtaatttacgaagtcaccggtaaactggagtcaagaacagaggg 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 caagctggttgatgaagtaatttacgaagtcaccggtaaactggagtcaagaacagaggg 192
Query: 620 cgatatcaaacttgatggtttcaatccttcagctgaagaagccgacgagggcacagactc 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cgatatcaaacttgatggtttcaatccttcagctgaagaagccgacgagggcacagactc 252
Query: 680 ggcggtcgttagcggtgtagacattgtcctgaaccacaggcttgtggagacttatgcctt 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggcggtcgttagcggtgtagacattgtcctgaaccacaggcttgtggagacttatgcctt 312
Query: 740 tggtgacaaaaagtcttacaccttgtaccttaaagactacatgaaaaaattagtggcaaa 799
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 313 tggtgacaaaaagtcttacaccctgtaccttaaagactacatgaaaaaattagtggcaaa 372
Query: 800 attagaagaaaaatcccctgaccaagtagatgtttttaagactaatatgaacaaagttat 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attagaagaaaaatcccctgaccaagtagatgtttttaagactaatatgaacaaagttat 432
Query: 860 gaaagacattctcagtaggtttaaggatctacagtttttcacgggggagtctatggattg 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gaaagacattctcagtaggtttaaggatctacagtttttcacgggggagtctatggattg 492
Query: 920 tgacggcatggtcgccatgctggaataccgtgacattgatggcgtctccacccccatcat 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgacggcatggtcgccatgctggaataccgtgacattgatggcgtctccacccccatcat 552
Query: 980 gatgttcttcaagcacggcctcgaggaggagaagttctaattccataagtgatacttttg 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gatgttcttcaagcacggcctcgaggaggagaagttctaattccataagtgatacttttg 612
Query: 1040 acaagtccagagcctaattactttttttatttatttacaccaatcatgtccgctcagcag 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 acaagtccagagcctaattactttttttatttatttacaccaatcatgtccgctcagcag 672
Query: 1100 ttaaccaaaccggcttcggctactccccatcaaaggctgaacttttgtaaagaataaatg 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ttaaccaaaccggcttcggctactccccatcaaaggctgaacttttgtaaagaataaatg 732
Query: 1160 ttgcatattattaaaataaataatttaatgaacaactg 1197
||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ttgcatattattaaaataaataatttaatgaacaactg 770
>BF14_365_C2
Length = 867
Score = 674 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Plus
Query: 444 gggctgggagccgtagtttcggtttttattatttttaatcgcccgtaatcctacaaaatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggctgggagccgtagtttcggtttttattatttttaatcgcccgtaatcctacaaaatg 60
Query: 504 aggatctataaggatattattactggtgacgagatgttctcggacacatacagaatcaag 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggatctataaggatattattactggtgacgagatgttctcggacacatacagaatcaag 120
Query: 564 ctggttgatgaagtaatttacgaagtcaccggtaaactggagtcaagaacagagggcgat 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggttgatgaagtaatttacgaagtcaccggtaaactggagtcaagaacagagggcgat 180
Query: 624 atcaaacttgatggtttcaatccttcagctgaagaagccgacgagggcacagactcggcg 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcaaacttgatggtttcaatccttcagctgaagaagccgacgagggcacagactcggcg 240
Query: 684 gtcgttagcggtgtagacattgtcctgaaccacaggcttgtggagacttatgcctttggt 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcgttagcggtgtagacattgtcctgaaccacaggcttgtggagacttatgcctttggt 300
Query: 744 gacaaaaagtcttacaccttgtaccttaaagactacatgaaaaa 787
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 gacaaaaagtcttacaccctgtaccttaaagactacatgaaaaa 344
>BF01052B1A07
Length = 221
Score = 196 bits (99), Expect = 7e-50
Identities = 129/139 (92%)
Strand = Plus / Minus
Query: 1061 tttttttatttatttacaccaatcatgtccgctcagcagttaaccaaaccggcttcggct 1120
||||||| ||| ||||| |||||||||||||||||||||||||||||||||| || || |
Sbjct: 213 tttttttttttttttaccccaatcatgtccgctcagcagttaaccaaaccgggtttgggt 154
Query: 1121 actccccatcaaaggctgaacttttgtaaagaataaatgttgcatattattaaaataaat 1180
| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 153 attccccatcaaagggtgaacttttgtaaagaataaatgttgcatttttttaaaataaat 94
Query: 1181 aatttaatgaacaactgaa 1199
|||||||||||||||||||
Sbjct: 93 aatttaatgaacaactgaa 75
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,809
Number of extensions: 6192
Number of successful extensions: 6192
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6192
Number of HSP's successfully gapped: 3
Length of query: 1519
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1502
Effective length of database: 8,119,229
Effective search space: 12195081958
Effective search space used: 12195081958
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)